Behaviors of individual microtubules and microtubule populations relative to critical concentrations: dynamic instability occurs when critical concentrations are driven apart by nucleotide hydrolysis

被引:16
作者
Jonasson, Erin M. [1 ,4 ]
Mauro, Ava J. [1 ,2 ,5 ]
Li, Chunlei [2 ,7 ]
Labuz, Ellen C. [1 ,8 ]
Mahserejian, Shant M. [2 ,9 ]
Scripture, Jared P. [1 ]
Gregoretti, Ivan V. [1 ]
Alber, Mark [2 ,6 ]
Goodson, Holly V. [1 ,3 ,10 ]
机构
[1] Univ Notre Dame, Dept Chem & Biochem, Notre Dame, IN 46556 USA
[2] Univ Notre Dame, Dept Appl & Computat Math & Stat, Notre Dame, IN 46556 USA
[3] Univ Notre Dame, Dept Biol Sci, Notre Dame, IN 46556 USA
[4] St Martins Univ, Depat Nat Sci, Lacey, WA 98503 USA
[5] Univ Massachusetts Amherst, Dept Math & Stat, Amherst, MA 01003 USA
[6] Univ Calif Riverside, Dept Math, Riverside, CA 92521 USA
[7] Apple, AML, Sunnyvale, CA 94085 USA
[8] Stanford Univ, Biophys Program, Stanford, CA 94305 USA
[9] Pacific Northwest Natl Lab, Richland, WA 99352 USA
[10] Cell Signaling Technol, Danvers, MA 01923 USA
基金
美国国家科学基金会;
关键词
GTP HYDROLYSIS; TUBULIN; CATASTROPHE; TRANSITION; PACLITAXEL; KINETICS; GROWTH; ACTIN; MODEL; CAP;
D O I
10.1091/mbc.E19-02-0101
中图分类号
Q2 [细胞生物学];
学科分类号
071009 ; 090102 ;
摘要
The concept of critical concentration (CC) is central to understanding the behavior of microtubules (MTs) and other cytoskeletal polymers. Traditionally, these polymers are understood to have one CC, measured in multiple ways and assumed to be the subunit concentration necessary for polymer assembly. However, this framework does not incorporate dynamic instability (DI), and there is work indicating that MTs have two CCs. We use our previously established simulations to confirm that MTs have (at least) two experimentally relevant CCs and to clarify the behavior of individuals and populations relative to the CCs. At free subunit concentrations above the lower CC (CCElongation), growth phases of individual filaments can occur transiently; above the higher CC (CCNetAssembly), the population's polymer mass will increase persistently. Our results demonstrate that most experimental CC measurements correspond to CCNetAssembly, meaning that "typical" DI occurs below the concentration traditionally considered necessary for polymer assembly. We report that [free tubulin] at steady state does not equal CCNetAssembly, but instead approaches CCNetAssembly asymptotically as [total tubulin] increases, and depends on the number of stable MT nucleation sites. We show that the degree of separation between CCElongation and CCNetAssembly depends on the rate of nucleotide hydrolysis. This clarified framework helps explain and unify many experimental observations.
引用
收藏
页码:589 / 618
页数:30
相关论文
共 72 条
[1]  
Alberts B, 2015, MOLECULAR BIOLOGY OF THE CELL, SIXTH EDITION, P1
[2]   Building the Microtubule Cytoskeleton Piece by Piece [J].
Alfaro-Aco, Ray ;
Petry, Sabine .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2015, 290 (28) :17154-17162
[3]   The effect of stathmin phosphorylation on microtubule assembly depends on tubulin critical concentration [J].
Amayed, P ;
Pantaloni, D ;
Carlier, MF .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2002, 277 (25) :22718-22724
[4]   Signatures of a macroscopic switching transition for a dynamic microtubule [J].
Aparna, J. S. ;
Padinhateeri, Ranjith ;
Das, Dibyendu .
SCIENTIFIC REPORTS, 2017, 7
[5]   Kinetic analysis of tubulin assembly in the presence of the microtubule-associated protein TOGp [J].
Bonfils, Claude ;
Bec, Nicole ;
Lacroix, Benjamin ;
Harricane, Marie-Cecile ;
Larroque, Christian .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2007, 282 (08) :5570-5581
[6]   Regulation of Microtubule Growth and Catastrophe: Unifying Theory and Experiment [J].
Bowne-Anderson, Hugo ;
Hibbel, Anneke ;
Howard, Jonathon .
TRENDS IN CELL BIOLOGY, 2015, 25 (12) :769-779
[7]   Microtubule dynamic instability: A new model with coupled GTP hydrolysis and multistep catastrophe [J].
Bowne-Anderson, Hugo ;
Zanic, Marija ;
Kauer, Monika ;
Howard, Jonathon .
BIOESSAYS, 2013, 35 (05) :452-461
[8]   Microtubule interactions with chemically diverse stabilizing agents:: Thermodynamics of binding to the paclitaxel site predicts cytotoxicity [J].
Buey, RM ;
Barasoain, I ;
Jackson, E ;
Meyer, A ;
Giannakakou, P ;
Paterson, I ;
Mooberry, S ;
Andreu, JM ;
Díaz, JF .
CHEMISTRY & BIOLOGY, 2005, 12 (12) :1269-1279
[9]   INTERFERENCE OF GTP HYDROLYSIS IN THE MECHANISM OF MICROTUBULE ASSEMBLY - AN EXPERIMENTAL-STUDY [J].
CARLIER, MF ;
HILL, TL ;
CHEN, YD .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA-BIOLOGICAL SCIENCES, 1984, 81 (03) :771-775
[10]  
CARLIER MF, 1984, J BIOL CHEM, V259, P9983