Polyclonal aptamer libraries as binding entities on a graphene FET based biosensor for the discrimination of apo- and holo-retinol binding protein 4

被引:19
作者
Kissmann, Ann-Kathrin [1 ]
Andersson, Jakob [2 ]
Bozdogan, Anil [2 ,3 ]
Amann, Valerie [1 ]
Kraemer, Markus [1 ]
Xing, Hu [1 ]
Raber, Heinz Fabian [1 ]
Kubiczek, Dennis H. [1 ]
Aspermair, Patrik [2 ]
Knoll, Wolfgang [2 ,4 ]
Rosenau, Frank [1 ]
机构
[1] Ulm Univ, Inst Pharmaceut Biotechnol, Albert Einstein Allee 11, D-89081 Ulm, Germany
[2] AIT Austrian Inst Technol GmbH, Giefinggasse 4, A-1210 Vienna, Austria
[3] CEST Kompetenzzentrum Elektrochem Oberflachentech, Viktor Kaplan Str 2, Wiener Neustadt, Austria
[4] Danube Private Univ, Steiner Landstr 124, A-3500 Krems, Austria
基金
欧盟地平线“2020”;
关键词
FIELD-EFFECT TRANSISTOR; LABEL-FREE DETECTION; INSULIN-RESISTANCE; DNA APTAMER; VITAMIN-A; TRANSPORT PROTEIN; HYBRIDIZATION; RBP4; RETINOL-BINDING-PROTEIN-4; INFLAMMATION;
D O I
10.1039/d1nh00605c
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
Oligonucleotide DNA aptamers represent an emergently important class of binding entities towards as different analytes as small molecules or even whole cells. Without requiring the canonical isolation of individual aptamers following the SELEX process, the focused polyclonal libraries prepared by this in vitro evolution and selection can directly be used to label their dedicated targets and to serve as binding molecules on surfaces. Here we report the first instance of a sensor able to discriminate between loaded and unloaded retinol-binding protein 4 (RBP4), an important biomarker for the prediction of diabetes and kidney disease. The sensor relies on two aptamer libraries tuned such that they discriminate between the protein isoforms, requiring no further sample labelling to detect RBP4 in both states. The evolution, binding properties of the libraries and the functionalization of graphene FET sensor chips are presented as well as the functionality of the resulting biosensor.
引用
收藏
页码:770 / 778
页数:9
相关论文
共 57 条
[1]   Novel graphene-based biosensor for early detection of Zika virus infection [J].
Afsahi, Savannah ;
Lerner, Mitchell B. ;
Goldstein, Jason M. ;
Lee, Joo ;
Tang, Xiaoling ;
Bagarozzi, Dennis A., Jr. ;
Pan, Deng ;
Locascio, Lauren ;
Walker, Amy ;
Barron, Francie ;
Goldsmith, Brett R. .
BIOSENSORS & BIOELECTRONICS, 2018, 100 :85-88
[2]   Reduced graphene oxide-based field effect transistors for the detection of E7 protein of human papillomavirus in saliva [J].
Aspermair, Patrik ;
Mishyn, Vladyslav ;
Bintinger, Johannes ;
Happy, Henri ;
Bagga, Komal ;
Subramanian, Palaniappan ;
Knoll, Wolfgang ;
Boukherroub, Rabah ;
Szunerits, Sabine .
ANALYTICAL AND BIOANALYTICAL CHEMISTRY, 2021, 413 (03) :779-787
[3]   Dual Monitoring of Surface Reactions in Real Time by Combined Surface-Plasmon Resonance and Field-Effect Transistor Interrogation [J].
Aspermair, Patrik ;
Ramach, Ulrich ;
Reiner-Rozman, Ciril ;
Fossati, Stefan ;
Lechner, Bernadette ;
Moya, Sergio E. ;
Azzaroni, Omar ;
Dostalek, Jakub ;
Szunerits, Sabine ;
Knoll, Wolfgang ;
Bintinger, Johannes .
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2020, 142 (27) :11709-11716
[4]   SELEX methods on the road to protein targeting with nucleic acid aptamers [J].
Bayat, Payam ;
Nosrati, Rahim ;
Alibolandi, Mona ;
Rafatpanah, Houshang ;
Abnous, Khalil ;
Khedri, Mostafa ;
Ramezani, Mohammad .
BIOCHIMIE, 2018, 154 :132-155
[5]   RETINOL-BINDING PROTEIN - THE SERUM TRANSPORT PROTEIN FOR VITAMIN-A [J].
BLANER, WS .
ENDOCRINE REVIEWS, 1989, 10 (03) :308-316
[6]   Gold nanoparticles-decorated graphene field-effect transistor biosensor for femtomolar MicroRNA detection [J].
Cai, Bingjie ;
Huang, Le ;
Zhang, Hong ;
Sun, Zhongyue ;
Zhang, Zhiyong ;
Zhang, Guo-Jun .
BIOSENSORS & BIOELECTRONICS, 2015, 74 :329-334
[7]   Increased Unbound Retinol-binding Protein 4 Concentration Induces Apoptosis through Receptor-mediated Signaling [J].
Chen, Chao-Hung ;
Hsieh, Tusty-Jiuan ;
Lin, Kun-Der ;
Lin, Hsing-Yi ;
Lee, Mei-Yueh ;
Hung, Wei-Wen ;
Hsiao, Pi-Jung ;
Shin, Shyi-Jang .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2012, 287 (13) :9694-9707
[8]   Label-free detection of DNA hybridization using transistors based on CVD grown graphene [J].
Chen, Tzu-Yin ;
Phan Thi Kim Loan ;
Hsu, Chang-Lung ;
Lee, Yi-Hsien ;
Wang, Jacob Tse-Wei ;
Wei, Kung-Hwa ;
Lin, Cheng-Te ;
Li, Lain-Jong .
BIOSENSORS & BIOELECTRONICS, 2013, 41 :103-109
[9]   Field-Effect Transistor Biosensor for Rapid Detection of Ebola Antigen [J].
Chen, Yantao ;
Ren, Ren ;
Pu, Haihui ;
Guo, Xiaoru ;
Chang, Jingbo ;
Zhou, Guihua ;
Mao, Shun ;
Kron, Michael ;
Chen, Junhong .
SCIENTIFIC REPORTS, 2017, 7
[10]   Elevated serum retinol-binding protein 4 concentrations are associated with chronic kidney disease but not with the higher carotid intima-media thickness in type 2 diabetic subjects [J].
Chu, Chih-Hsun ;
Lam, Hing-Chung ;
Lee, Jenn-Kuen ;
Lu, Chih-Chen ;
Sun, Chun-Chin ;
Cheng, Hsin-Ju ;
Wang, Mei-Chun ;
Chuang, Ming-Ju .
ENDOCRINE JOURNAL, 2011, 58 (10) :841-847