The complete chloroplast genome of Cupressus chengiana

被引：1

作者：

Zhang, Zi-long ^{[1
]}

Ma, Li-ying ^{[1
]}

Yao, Hongbin ^{[1
]}

Yang, Xin ^{[1
]}

Luo, Ji-huai ^{[1
]}

Gong, Xue ^{[1
]}

Wei, Shuo-yue ^{[1
]}

Li, Quan-fang ^{[1
]}

Wang, Wei ^{[1
]}

Sun, Hong-bin ^{[1
]}

机构：

[1] Key Lab Sci & Technol Res & Applicat, Lanzhou 730070, Gansu, Peoples R China

来源：

CONSERVATION GENETICS RESOURCES | 2017年 / 9卷 / 03期

关键词：

Chloroplast genome; Cupressus chengiana; Phylogenetic analysis;

D O I：

10.1007/s12686-016-0675-z

中图分类号：

X176 [生物多样性保护];

学科分类号：

090705 ;

摘要：

The whole chloroplast (cp) genome sequence of Cupressus chengiana has been characterized from Illumina pair-end sequencing. The circular genome is 128,151 bp in length with 115 single copy genes and two duplicated genes (trnl-CAU, trnQ-UUG). This genome contains 82 protein-coding genes, 31 tRNA genes and four ribosomal RNA genes (four rRNA species). In these genes, eight genes (atpF, ndhA, ndhB, rpoC1, petD, petB, rpl16 and rpl2) harbor a single intron and two genes (rps12 and ycf3) harbor two introns. This cp genome does not contain canonical IRs, and the overall GC content is 34.7%. Further, phylogenetic analysis suggested that C. chengiana is closely related to the species of C. gigantea.

引用

页码：347 / 349

页数：3

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