Phage satellites and their emerging applications in biotechnology

被引:25
作者
Ibarra-Chavez, Rodrigo [1 ]
Hansen, Mads Frederik [1 ,2 ]
Pinilla-Redondo, Rafael [1 ]
Seed, Kimberley D. [3 ,4 ]
Trivedi, Urvish [1 ]
机构
[1] Univ Copenhagen, Dept Biol, Sect Microbiol, DK-2100 Copenhagen, Denmark
[2] Max Planck Inst Terr Microbiol, D-35043 Marburg, Germany
[3] Univ Calif Berkeley, Dept Plant & Microbial Biol, Berkeley, CA 94720 USA
[4] Chan Zuckerberg Biohub, San Francisco, CA 94158 USA
关键词
phage satellites; SynBio; mobile genetic elements; phage-inducible chromosomal islands; virulence; molecular piracy; CAPSID-SIZE DETERMINATION; PATHOGENICITY ISLAND INTERFERENCE; MOBILE GENETIC ELEMENTS; CRISPR-CAS SYSTEMS; STAPHYLOCOCCUS-AUREUS; HOST-RANGE; PSEUDOMONAS-AERUGINOSA; BACTERIOPHAGE P4; BIOINFORMATIC ANALYSIS; CHROMOSOMAL ISLANDS;
D O I
10.1093/femsre/fuab031
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
The arms race between (bacterio)phages and their hosts is a recognised hot spot for genome evolution. Indeed, phages and their components have historically paved the way for many molecular biology techniques and biotech applications. Further exploration into their complex lifestyles has revealed that phages are often parasitised by distinct types of hyperparasitic mobile genetic elements. These so-called phage satellites exploit phages to ensure their own propagation and horizontal transfer into new bacterial hosts, and their prevalence and peculiar lifestyle has caught the attention of many researchers. Here, we review the parasite-host dynamics of the known phage satellites, their genomic organisation and their hijacking mechanisms. Finally, we discuss how these elements can be repurposed for diverse biotech applications, kindling a new catalogue of exciting tools for microbiology and synthetic biology.
引用
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页数:20
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