Data Descriptor: Marine microbial metagenomes sampled across space and time

被引：138

作者：

Biller, Steven J. ^{[1
,11
]}

Berube, Paul M. ^{[1
]}

Dooley, Keven ^{[1
]}

Williams, Madeline ^{[1
]}

Satinsky, Brandon M. ^{[1
]}

Hackl, Thomas ^{[1
]}

Hogle, Shane L. ^{[1
]}

Coe, Allison ^{[1
]}

Bergauer, Kristin ^{[2
]}

Bouman, Heather A. ^{[3
]}

Browning, Thomas J. ^{[4
]}

De Corte, Daniele ^{[5
]}

Hassler, Christel ^{[6
]}

Hulston, Debbie ^{[7
]}

Jacquot, Jeremy E. ^{[8
]}

Maas, Elizabeth W. ^{[9
]}

Reinthaler, Thomas ^{[2
]}

Sintes, Eva ^{[2
]}

Yokokawa, Taichi ^{[5
]}

Chisholm, Sallie W. ^{[1
,10
]}

机构：

[1] MIT, Dept Civil & Environm Engn, 77 Massachusetts Ave, Cambridge, MA 02139 USA

[2] Univ Vienna, Dept Limnol & Biooceanog, A-1090 Vienna, Austria

[3] Univ Oxford, Dept Earth Sci, Oxford OX1 3AN, England

[4] GEOMAR Helmholtz Ctr Ocean Res, Marine Biogeochem Div, D-24148 Kiel, Germany

[5] Japan Agcy Marine Earth Sci & Technol, Res & Dev Ctr Marine Biosci, Yokosuka, Kanagawa 2370061, Japan

[6] Univ Geneva, Dept FA Forel Environm & Aquat Sci, CH-1211 Geneva, Switzerland

[7] Natl Inst Water & Atmospher Res, Auckland 1010, New Zealand

[8] Univ Southern Calif, Dept Biol Sci, Los Angeles, CA 90089 USA

[9] Minist Primary Ind, Napier 4144, New Zealand

[10] MIT, Dept Biol, 77 Massachusetts Ave, Cambridge, MA 02139 USA

[11] Wellesley Coll, Dept Biol Sci, Wellesley, MA 02481 USA

来源：

SCIENTIFIC DATA | 2018年 / 5卷

基金：

美国国家科学基金会;

关键词：

PACIFIC SUBTROPICAL GYRE; PROCHLOROCOCCUS ECOTYPES; ATLANTIC; OCEAN; SERIES; ABUNDANCES; DYNAMICS; LIGHT;

D O I：

10.1038/sdata.2018.176

中图分类号：

O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];

学科分类号：

07 ; 0710 ; 09 ;

摘要：

Recent advances in understanding the ecology of marine systems have been greatly facilitated by the growing availability of metagenomic data, which provide information on the identity, diversity and functional potential of the microbial community in a particular place and time. Here we present a dataset comprising over 5 terabases of metagenomic data from 610 samples spanning diverse regions of the Atlantic and Pacific Oceans. One set of metagenomes, collected on GEOTRACES cruises, captures large geographic transects at multiple depths per station. The second set represents two years of time-series data, collected at roughly monthly intervals from 3 depths at two long-term ocean sampling sites, Station ALOHA and BATS. These metagenomes contain genomic information from a diverse range of bacteria, archaea, eukaryotes and viruses. The data's utility is strengthened by the availability of extensive physical, chemical, and biological measurements associated with each sample. We expect that these metagenomes will facilitate a wide range of comparative studies that seek to illuminate new aspects of marine microbial ecosystems.

引用

页数：7

共 22 条

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