Regulation of microRNA biogenesis and its crosstalk with other cellular pathways

被引:1043
作者
Treiber, Thomas [1 ]
Treiber, Nora [1 ]
Meister, Gunter [1 ]
机构
[1] Univ Regensburg, Lab RNA Biol, Biochem Ctr Regensburg BZR, Regensburg, Germany
基金
欧洲研究理事会;
关键词
RNA-BINDING PROTEINS; MIRNA BIOGENESIS; NUCLEAR EXPORT; POSTTRANSCRIPTIONAL REGULATION; MICROPROCESSOR ACTIVITY; FUNCTIONAL INSIGHTS; SECONDARY STRUCTURE; TARGET RECOGNITION; CRYSTAL-STRUCTURE; PASSENGER-STRAND;
D O I
10.1038/s41580-018-0059-1
中图分类号
Q2 [细胞生物学];
学科分类号
071009 ; 090102 ;
摘要
MicroRNAs (miRNAs) are short non-coding RNAs that inhibit the expression of target genes by directly binding to their mRNAs. miRNAs are transcribed as precursor molecules, which are subsequently cleaved by the endoribonucleases Drosha and Dicer. Mature miRNAs are bound by a member of the Argonaute (AGO) protein family to form the RNA-induced silencing complex (RISC) in a process termed RISC loading. Advances in structural analyses of Drosha and Dicer complexes enabled elucidation of the mechanisms that drive these molecular machines. Transcription of miRNAs, their processing by Drosha and Dicer and RISC loading are key steps in miRNA biogenesis, and various additional factors facilitate, support or inhibit these processes. Recent work has revealed that regulatory factors not only coordinate individual miRNA processing steps but also connect miRNA biogenesis with other cellular processes. Protein phosphorylation, for example, links miRNA biogenesis to various signalling pathways, and such modifications are often associated with disease. Furthermore, not all miRNAs follow canonical processing routes, and many non-canonical miRNA biogenesis pathways have recently been characterized.
引用
收藏
页码:5 / 20
页数:16
相关论文
共 205 条
[1]   Beyond Secondary Structure: Primary-Sequence Determinants License Pri-miRNA Hairpins for Processing [J].
Auyeung, Vincent C. ;
Ulitsky, Igor ;
McGeary, Sean E. ;
Bartel, David P. .
CELL, 2013, 152 (04) :844-858
[2]   Mouse ES cells express endogenous shRNAs, siRNAs, and other Microprocessor-independent, Dicer-dependent small RNAs [J].
Babiarz, Joshua E. ;
Ruby, J. Graham ;
Wang, Yangming ;
Bartel, David P. ;
Blelloch, Robert .
GENES & DEVELOPMENT, 2008, 22 (20) :2773-2785
[3]   A role for noncanonical microRNAs in the mammalian brain revealed by phenotypic differences in Dgcr8 versus Dicer1 knockouts and small RNA sequencing [J].
Babiarz, Joshua E. ;
Hsu, Ruby ;
Melton, Collin ;
Thomas, Molly ;
Ullian, Erik M. ;
Blelloch, Robert .
RNA, 2011, 17 (08) :1489-1501
[4]   Coupled RNA Processing and Transcription of Intergenic Primary MicroRNAs [J].
Ballarino, Monica ;
Pagano, Francesca ;
Girardi, Erika ;
Morlando, Mariangela ;
Cacchiarelli, Davide ;
Marchioni, Marcella ;
Proudfoot, Nicholas J. ;
Bozzoni, Irene .
MOLECULAR AND CELLULAR BIOLOGY, 2009, 29 (20) :5632-5638
[5]   The LIN28/let-7 Pathway in Cancer [J].
Balzeau, Julien ;
Menezes, Miriam R. ;
Cao, Siyu ;
Hagan, John P. .
FRONTIERS IN GENETICS, 2017, 8 :1-16
[6]   MicroRNAs: Target Recognition and Regulatory Functions [J].
Bartel, David P. .
CELL, 2009, 136 (02) :215-233
[7]   miRNA-based therapies: strategies and delivery platforms for oligonucleotide and non-oligonucleotide agents [J].
Baumann, Volker ;
Winkler, Johannes .
FUTURE MEDICINAL CHEMISTRY, 2014, 6 (17) :1967-1984
[8]   Ribosome Profiling Shows That miR-430 Reduces Translation Before Causing mRNA Decay in Zebrafish [J].
Bazzini, Ariel A. ;
Lee, Miler T. ;
Giraldez, Antonio J. .
SCIENCE, 2012, 336 (6078) :233-237
[9]   Mammalian mirtron genes [J].
Berezikov, Eugene ;
Chung, Wei-Jen ;
Willis, Jason ;
Cuppen, Edwin ;
Lai, Eric C. .
MOLECULAR CELL, 2007, 28 (02) :328-336
[10]   Kinetic analysis reveals successive steps leading to miRNA-mediated silencing in mammalian cells [J].
Bethune, Julien ;
Artus-Revel, Caroline G. ;
Filipowicz, Witold .
EMBO REPORTS, 2012, 13 (08) :716-723