Effect of electrostatic interaction on the mechanism of dehalogenation catalyzed by haloalkane dehalogenase

被引:1
|
作者
Zhang, Yuhua [1 ]
Chen, Dezhan [1 ]
Zhang, Honghong [1 ]
Liu, Jianbiao [1 ]
Mi, Shizhen [1 ]
Zhang, Guiqiu [1 ]
机构
[1] Shandong Normal Univ, Coll Chem Chem Engn & Mat Sci, Jinan 250014, Peoples R China
关键词
haloalkane dehalogenase; 1; 2-dichloroethane; solvent effect; natural bond orbital analysis; NUCLEOPHILIC-SUBSTITUTION REACTION; MOLECULAR-DYNAMICS SIMULATIONS; S(N)2 DISPLACEMENT; ENZYME CATALYSIS; KINETIC-ANALYSIS; HALIDE-BINDING; 1,2-DICHLOROETHANE; SOLVENT; SITE; HYDROLYSIS;
D O I
10.1002/qua.22509
中图分类号
O64 [物理化学(理论化学)、化学物理学];
学科分类号
070304 ; 081704 ;
摘要
Theoretical calculation has been carried out for the nucleophilic displacement reaction of 1,2-dichloroethane catalyzed by haloalkane dehalogenase. The results indicate that different hydrogen bond patterns of the oxyanion hole and the halide-stabilizing residues play an important role in the dehalogenation reaction. They cause concertedly an earlier transition state (TS) with the activation barrier of 16.60 kcal/mol. The stabilization effect of Trp125 and Trp175 on chlorine atom in the TS is larger than that of the reactant complex by 15.67 kcal/mol so that, they make contribution to the stabilization of the TS. Moreover, the reaction shows the enzymatic action can be attributed to a combination of reactant-state destabilization and transition-state electrostatic stabilization. (C) 2011 Wiley Periodicals, Inc. Int J Quantum Chem, 2011
引用
收藏
页码:889 / 899
页数:11
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