One-dimensional convolutional neural networks design for fluorescence spectroscopy with prior knowledge: explainability techniques applied to olive oil fluorescence spectra

被引:1
|
作者
Venturini, Francesca [1 ,2 ]
Michelucci, Umberto [2 ]
Sperti, Michela [3 ]
Gucciardi, Arnaud [2 ,4 ]
Deriu, Marco Agostino [3 ]
机构
[1] Zurich Univ Appl Sci, Inst Appl Math, Tech Str 9, CH-8401 Winterthur, Switzerland
[2] TOELT Llc, Machine Learning Res & Dev, Birchlenstr 25, CH-8600 Dubendorf, Switzerland
[3] Politecn Torino, Dept Mech & Aerosp Engn, PolitoBIOMed Lab, Turin, Italy
[4] Univ Ljubljana, Artificial Intelligence Lab, Ljubljana, Slovenia
来源
OPTICAL SENSING AND DETECTION VII | 2022年 / 12139卷
基金
欧盟地平线“2020”;
关键词
Fluorescence spectroscopy; fluorescence sensor; olive oil; machine learning; artificial neural networks; quality control; explainability; convolutional neural networks;
D O I
10.1117/12.2621646
中图分类号
TM [电工技术]; TN [电子技术、通信技术];
学科分类号
0808 ; 0809 ;
摘要
Optical spectra, and particularly fluorescence spectra, contain a large quantity of information about the substances and their interaction with the environment. It is of great interest, therefore, to try to extract as much of this information as possible, as optical measurements can be easy, non-invasive, and can happen in-situ making the data collection a very appealing method of gathering knowledge. Artificial neural networks are known for their feature extraction capabilities and are therefore well suited for this challenge. In this work, inspired by convolutional neural network (CNN) architectures in 2D and their success with images, a novel approach using one-dimensional convolutional neural networks (1D-CNN) is used to extract information on the measured spectra by using explainability techniques. The 1D-CNN architecture has as input the entire fluorescence spectrum and takes advantage in its design of prior knowledge about the instrumentation and sample characteristics as, for example, spectrometer resolution or the expected number of relevant features in the spectrum. Even if network performance is good, it remains an open question if the features used for the predictions make sense from a physical and chemical point of view and if they match what is known from existing studies. This work studies the output of the convolutional layers, known as feature maps, to understand which features the network has effectively used for the predictions, and thus which part of the measured spectra contains the relevant information about the phenomena at the basis of what has to be predicted. The proposed approach is demonstrated by applying it to the determination of the UV absorbance at 232 nm, K232, from fluorescence spectra using a dataset of 18 Spanish olive oils, which were chemically analysed from certified laboratories. The 1D-CNN successfully predicts the parameter K232 and enables, by studying feature maps, the clear identification of the relevant spectral features. The main contributions of this work are two. Firstly, it describes how designing the neural network architecture with prior knowledge (spectrometer resolution, etc.) will help the network in learning features that have a clear connection to the chemical composition of the substances, and thus are clearly explainable. Secondly, it shows how, in the case of olive oil, the identified features match perfectly the relevant features known from existing previous studies, thus confirming that the network is learning from the underlying chemical process.
引用
收藏
页数:8
相关论文
共 3 条
  • [1] Chemical analysis of olive oils from fluorescence spectra thanks to one-dimensional convolutional neural networks
    Sperti, Michela
    Michelucci, Umberto
    Venturini, Francesca
    Gucciardi, Arnaud
    Deriu, Marco A.
    OPTICAL SENSING AND DETECTION VII, 2022, 12139
  • [2] Extraction of physicochemical properties from the fluorescence spectrum with 1D convolutional neural networks: Application to olive oil
    Venturini, Francesca
    Sperti, Michela
    Michelucci, Umberto
    Gucciardi, Arnaud
    Martos, Vanessa M.
    Deriu, Marco A.
    JOURNAL OF FOOD ENGINEERING, 2023, 336
  • [3] Fast dentification of overlapping fluorescence spectra of oil species based on LDA and two-dimensional convolutional neural network
    Chen, Xiaoyu
    Hu, Yunrui
    Li, Xinyi
    Kong, Deming
    Guo, Menghao
    SPECTROCHIMICA ACTA PART A-MOLECULAR AND BIOMOLECULAR SPECTROSCOPY, 2025, 324