Validation and utility of ARDS subphenotypes identified by machine-learning models using clinical data: an observational, multicohort, retrospective analysis

被引:114
作者
Maddali, Manoj, V [1 ,2 ]
Churpek, Matthew [8 ]
Pham, Tai [9 ,10 ]
Rezoagli, Emanuele [11 ]
Zhuo, Hanjing [3 ,5 ]
Zhao, Wendi [2 ]
He, June [12 ]
Delucchi, Kevin L. [6 ]
Wang, Chunxue [13 ]
Wickersham, Nancy [13 ]
McNeil, J. Brennan [13 ]
Jauregui, Alejandra [3 ,5 ]
Ke, Serena [3 ,5 ]
Vessel, Kathryn [3 ,5 ]
Gomez, Antonio [3 ,15 ]
Hendrickson, Carolyn M. [3 ,15 ]
Kangelaris, Kirsten N. [2 ]
Sarma, Aartik [3 ]
Leligdowicz, Aleksandra [3 ,16 ]
Liu, Kathleen D. [4 ,5 ,6 ]
Matthay, Michael A. [3 ,5 ,7 ]
Ware, Lorraine B. [13 ,14 ]
Laffey, John G. [17 ,18 ]
Bellani, Giacomo [11 ,19 ]
Calfee, Carolyn S. [3 ,7 ]
Sinha, Pratik [12 ,20 ]
机构
[1] Stanford Univ, Dept Med, Div Pulm Allergy & Crit Care Med, Stanford, CA 94305 USA
[2] Univ Calif San Francisco, Div Hosp Med, San Francisco, CA 94143 USA
[3] Univ Calif San Francisco, Div Pulm Crit Care Allergy & Sleep Med, San Francisco, CA 94143 USA
[4] Univ Calif San Francisco, Div Nephrol, San Francisco, CA 94143 USA
[5] Univ Calif San Francisco, Cardiovasc Res Inst, Dept Med, San Francisco, CA 94143 USA
[6] Univ Calif San Francisco, Dept Psychiat, San Francisco, CA USA
[7] Univ Calif San Francisco, Dept Anesthesia, San Francisco, CA USA
[8] Univ Wisconsin Madison, Dept Med, Div Allergy Pulm & Crit Care, Madison, WI USA
[9] Hop Bicetre, AP HP, DMU 4 CORREVE Malad Coeur & Vaisseaux, Serv Med Intens Reanimat,FHU Sepsis,Grp Rech Clin, Le Kremlin Bicetre, France
[10] Univ Paris Saclay, Univ Paris Sud, CESP, Inserm U1018,Equipe Epidemiol Resp Integrat,UVSQ, F-94807 Villejuif, France
[11] Univ Milano Bicocca, Dept Med & Surg, Monza, Italy
[12] Washington Univ, Sch Med, Div Clin & Translat Res, St Louis, MO 63110 USA
[13] Vanderbilt Univ, Med Ctr, Div Allergy Pulm & Crit Care Med, Dept Med, Nashville, TN USA
[14] Vanderbilt Univ, Med Ctr, Dept Pathol Microbiol & Immunol, Nashville, TN USA
[15] Zuckerberg San Francisco Gen Hosp & Trauma Ctr, Div Allergy Pulm & Crit Care Med, Dept Med, San Francisco, CA USA
[16] Univ Toronto, Interdept Div Crit Care Med, Toronto, ON, Canada
[17] Natl Univ Ireland Galway, CURAM Ctr Res Med Devices, Sch Med, Regenerat Med Inst, Galway, Ireland
[18] Galway Univ Hosp, Anaesthesia & Intens Care Med, Galway, Ireland
[19] ASST Monza Osped San Gerardo, Dept Anesthesia & Intens Care Med, Monza, Italy
[20] Washington Univ, Dept Anesthesia, Div Crit Care, St Louis, MO 63110 USA
基金
美国国家卫生研究院;
关键词
RESPIRATORY-DISTRESS-SYNDROME; ACUTE LUNG INJURY;
D O I
10.1016/S2213-2600(21)00461-6
中图分类号
R4 [临床医学];
学科分类号
1002 ; 100602 ;
摘要
Background Two acute respiratory distress syndrome (ARDS) subphenotypes (hyperinflammatory and hypoinflammatory) with distinct clinical and biological features and differential treatment responses have been identified using latent class analysis (LCA) in seven individual cohorts. To facilitate bedside identification of subphenotypes, clinical classifier models using readily available clinical variables have been described in four randomised controlled trials. We aimed to assess the performance of these models in observational cohorts of ARDS. Methods In this observational, multicohort, retrospective study, we validated two machine-learning clinical classifier models for assigning ARDS subphenotypes in two observational cohorts of patients with ARDS: Early Assessment of Renal and Lung Injury (EARLI; n=335) and Validating Acute Lung Injury Markers for Diagnosis (VALID; n=452), with LCA-derived subphenotypes as the gold standard. The primary model comprised only vital signs and laboratory variables, and the secondary model comprised all predictors in the primary model, with the addition of ventilatory variables and demographics. Model performance was assessed by calculating the area under the receiver operating characteristic curve (AUC) and calibration plots, and assigning subphenotypes using a probability cutoff value of 0.5 to determine sensitivity, specificity, and accuracy of the assignments. We also assessed the performance of the primary model in EARLI using data automatically extracted from an electronic health record (EHR; EHR-derived EARLI cohort). In Large Observational Study to Understand the Global Impact of Severe Acute Respiratory Failure (LUNG SAFE; n=2813), a multinational, observational ARDS cohort, we applied a custom classifier model (with fewer variables than the primary model) to determine the prognostic value of the subphenotypes and tested their interaction with the positive end-expiratory pressure (PEEP) strategy, with 90-day mortality as the dependent variable. Findings The primary clinical classifier model had an area under receiver operating characteristic curve (AUC) of 0.92 (95% CI 0.90-0.95) in EARLI and 0.88 (0.84-0.91) in VALID. Performance of the primary model was similar when using exclusively EHR-derived predictors compared with manually curated predictors (AUC=0.88 [95% CI 0.81-0.94] vs 0.92 [0.88-0.97]). In LUNG SAFE, 90-day mortality was higher in patients assigned the hyperinflammatory subphenotype than in those with the hypoinflammatory phenotype (414 [57%] of 725 vs 694 [33%] of 2088; p<0.0001). There was a significant treatment interaction with PEEP strategy and ARDS subphenotype (p=0.041), with lower 90-day mortality in the high PEEP group of patients with the hyperinflammatory subphenotype (hyperinflammatory subphenotype: 169 [54%] of 313 patients in the high PEEP group vs 127 [62%] of 205 patients in the low PEEP group; hypoinflammatory subphenotype: 231 [34%] of 675 patients in the high PEEP group vs 233 [32%] of 734 patients in the low PEEP group). Interpretation Classifier models using clinical variables alone can accurately assign ARDS subphenotypes in observational cohorts. Application of these models can provide valuable prognostic information and could inform management strategies for personalised treatment, including application of PEEP, once prospectively validated. Copyright (C) 2021 Elsevier Ltd. All rights reserved.
引用
收藏
页码:367 / 377
页数:11
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