Cell survival and DNA damage repair are promoted in the human blood thanatotranscriptome shortly after death

被引:4
作者
Antiga, Laura G. [1 ,2 ]
Sibbens, Lode [1 ]
Abakkouy, Yasmina [1 ]
Decorte, Ronny [1 ,3 ]
Van Den Bogaert, Wouter [1 ,3 ]
Van de Voorde, Wim [1 ,3 ]
Bekaert, Bram [1 ,3 ]
机构
[1] Katholieke Univ Leuven, Dept Imaging & Pathol, Forens Biomed Sci, Herestr 49,Box 7003 71, B-3000 Leuven, Belgium
[2] Univ Pompeu Fabra UPF, Dept Expt & Hlth Sci CEXS, Barcelona, Spain
[3] UZ Leuven, Lab Forens Genet, B-3000 Leuven, Belgium
关键词
MESSENGER-RNA; POSTMORTEM INTERVAL; IDENTIFICATION; DEGRADATION; TISSUE; TIME; MANNOSYLATION; INFLAMMATION; EXPRESSION; INFERENCE;
D O I
10.1038/s41598-021-96095-z
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
RNA analysis of post-mortem tissues, or thanatotranscriptomics, has become a topic of interest in forensic science due to the essential information it can provide in forensic investigations. Several studies have previously investigated the effect of death on gene transcription, but it has never been conducted with samples of the same individual. For the first time, a longitudinal mRNA expression analysis study was performed with post-mortem human blood samples from individuals with a known time of death. The results reveal that, after death, two clearly differentiated groups of up- and down-regulated genes can be detected. Pathway analysis suggests active processes that promote cell survival and DNA damage repair, rather than passive degradation, are the source of early post-mortem changes of gene expression in blood. In addition, a generalized linear model with an elastic net restriction predicted post-mortem interval with a root mean square error of 4.75 h. In conclusion, we demonstrate that post-mortem gene expression data can be used as biomarkers to estimate the post-mortem interval though further validation using independent sample sets is required before use in forensic casework.
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页数:14
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