The complete mitochondrial genome of Coptotermes testaceus (Isoptera: Rhinotermitidae)

被引:1
作者
Li, Ya-Xiao [1 ]
Wang, Xin-Guo [2 ]
Ou, Jing [1 ]
Yao, Fu-Jiao [1 ]
Yang, Yan [1 ]
Wei, Zhao-Ming [1 ]
机构
[1] Shaanxi Normal Univ, Coll Life Sci, 199 South Changan Rd, Xian 710062, Shaanxi Provinc, Peoples R China
[2] Huangpu Exit Entry Inspect & Quarantine Bur Guang, Guangzhou, Guangdong, Peoples R China
关键词
Coptotermes testaceus; Isoptera; mitochondrial genome; PHYLOGENY; TERMITES;
D O I
10.3109/19401736.2015.1066351
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
The complete circular mitochondrial genome (mitogenome) of Coptotermes testaceus is 15 752bp in size, containing 37 typical genes and one non-coding AT-rich region. The AT content of the AT-rich region is 68.3%. All protein coding genes (PCGs) start with standard ATN initiation codons and end with complete termination codons TAA or TAG except for cox2, atp8, and nad5 genes using an incomplete stop codon T. tRNA genes are predicted with a characteristic cloverleaf secondary structure except for trnS1((AGN)), whose dihydrouridine (DHU) arm is replaced by a simple loop. The size of the large and small ribosomal RNA genes are 1315 and 818 bp, respectively. Phylogenetic analysis found that (i) the C. testaceus clade formed the sister group with another clade containing Coptotermes lacteus and Coptotermes formosanus; and (ii) Coptotermes lacteus had a close relationship with Coptotermes clade, but with lower credibility than other clades, the bootstrap value was 97%.
引用
收藏
页码:3466 / 3468
页数:3
相关论文
共 6 条
[1]   A mitochondrial genome phylogeny of termites (Blattodea: Termitoidae): Robust support for interfamilial relationships and molecular synapomorphies define major clades [J].
Cameron, Stephen L. ;
Lo, Nathan ;
Bourguignon, Thomas ;
Svenson, Gavin J. ;
Evans, Theodore A. .
MOLECULAR PHYLOGENETICS AND EVOLUTION, 2012, 65 (01) :163-173
[2]  
Engel MS, 2004, AM MUS NOVIT, P1, DOI 10.1206/0003-0082(2004)432<0001:FNFTI>2.0.CO
[3]  
2
[4]  
Huang F.S., 2000, FAUNA SINICA INSECTA, V17
[5]  
Ke Yun-Ling, 2015, Huanjing Kunchong Xuebao, V37, P139
[6]   Searching for the optimal data partitioning strategy in mitochondrial phylogenomics: A phylogeny of Acridoidea (Insecta: Orthoptera: Caelifera) as a case study [J].
Leavitt, James R. ;
Hiatt, Kevin D. ;
Whiting, Michael F. ;
Song, Hojun .
MOLECULAR PHYLOGENETICS AND EVOLUTION, 2013, 67 (02) :494-508