Tetranucleotide microsatellite markers in Cryptomeria japonica D. Don

被引：7

作者：

Guan, L. ^{[2
]}

Shiraishi, S. ^{[1
]}

机构：

[1] Kyushu Univ, Fac Agr, Fukuoka 8128581, Japan

[2] Kyushu Univ, Grad Sch Bioresource & Bioenvironm Sci, Fukuoka 8128581, Japan

来源：

CONSERVATION GENETICS RESOURCES | 2011年 / 3卷 / 02期

关键词：

Japanese cedar; Cryptomeria japonica; Tetranucleotide microsatellite; Suppression PCR; LINKAGE MAP;

D O I：

10.1007/s12686-010-9342-y

中图分类号：

X176 [生物多样性保护];

学科分类号：

090705 ;

摘要：

Japanese cedar (Cryptomeria japonica D. Don) is an important ecological and commercial species in Japan. We isolated 11 polymorphic tetranucleotide microsatellite markers by using a ligation-mediated suppression PCR technique for Japanese cedar and investigated the polymorphism of these markers in 24 individuals from natural populations. The number of alleles ranged from 6 to 20 per locus, and expected heterozygosities of the 11 loci ranged from 0.664 to 0.950. These polymorphic markers will be powerful tools for the studies of individual genotyping, population genetics, and conservation genetics.

引用

页码：283 / 285

页数：3

共 11 条

[1] Misalignment-mediated DNA polymerase β mutations:: Comparison of microsatellite and frame-shift error rates using a forward mutation assay [J].

Eckert, KA ;

Mowery, A ;

Hile, SE .

BIOCHEMISTRY, 2002, 41 (33) :10490-10498

[2] Revising how the computer program CERVUS accommodates genotyping error increases success in paternity assignment [J].

Kalinowski, Steven T. ;

Taper, Mark L. ;

Marshall, Tristan C. .

MOLECULAR ECOLOGY, 2007, 16 (05) :1099-1106

[3] Development of microsatellite markers in black locust (Robinia pseudoacacia) using a dual-supression-PCR technique [J].

Lian, C ;

Hogetsu, T .

MOLECULAR ECOLOGY NOTES, 2002, 2 (03) :211-213

[4] Development and characterization of microsatellite markers for Cryptomeria japonica D.Don [J].

Moriguchi, Y ;

Iwata, H ;

Ujino-Ihara, T ;

Yoshimura, K ;

Taira, H ;

Tsumura, Y .

THEORETICAL AND APPLIED GENETICS, 2003, 106 (04) :751-758

[5] A LINKAGE MAP FOR SUGI (CRYPTOMERIA-JAPONICA) BASED ON RFLP, RAPD, AND ISOZYME LOCI [J].

MUKAI, Y ;

SUYAMA, Y ;

TSUMURA, Y ;

KAWAHARA, T ;

YOSHIMARU, H ;

KONDO, T ;

TOMARU, N ;

KURAMOTO, N ;

MURAI, M .

THEORETICAL AND APPLIED GENETICS, 1995, 90 (06) :835-840

[6] Characterization and multiplex genotyping of alpaca tetranucleotide microsatellite markers [J].

Munyard, K. A. ;

Ledger, J. M. ;

Lee, C. Y. ;

Babra, C. ;

Groth, D. M. .

SMALL RUMINANT RESEARCH, 2009, 85 (2-3) :153-156

[7] AFLP and CAPS linkage maps of Cryptomeria japonica [J].

Nikaido, AM ;

Ujino, T ;

Iwata, H ;

Yoshimura, K ;

Yoshimura, H ;

Suyama, Y ;

Murai, M ;

Nagasaka, K ;

Tsumura, Y .

THEORETICAL AND APPLIED GENETICS, 2000, 100 (06) :825-831

[8] Genotyping errors: Causes, consequences and solutions [J].

Pompanon, F ;

Bonin, A ;

Bellemain, E ;

Taberlet, P .

NATURE REVIEWS GENETICS, 2005, 6 (11) :847-859

[9] GENEPOP′007:: a complete re-implementation of the GENEPOP software for Windows and Linux [J].

Rousset, Francois .

MOLECULAR ECOLOGY RESOURCES, 2008, 8 (01) :103-106

[10]

Tani N, 2003, GENETICS, V165, P1551

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