Urinary proteomics and metabolomics in the diagnosis of pediatric disorders

被引:12
作者
Vaidyanathan, Kannan [1 ]
机构
[1] Pushpagiri Inst Med Sci & Res Ctr, Dept Biochem, Tiruvalla 689101, India
关键词
Biomarkers; Mass spectrometry; Metabolomics; Pediatric disorders; Urinary proteome profile; TANDEM MASS-SPECTROMETRY; LC-MS/MS; INITIAL VALIDATION; KIDNEY-DISEASE; INBORN-ERRORS; CHILDREN; BIOMARKERS; DISCOVERY; QUANTIFICATION; PLASMA;
D O I
10.1002/prca.201400093
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Proteomics is the study of structures and functions of proteins, while metabolomics is the study of small-molecule metabolites in the cells, tissues, and organs of the organism. Proteomic technologies have wide applications in medical field. The current revolution in proteomics has led to the discovery of several new protein markers for various disorders. Urinary proteomics and metabolomics have also evolved in the recent years, for the diagnosis of both renal and nonrenal disorders. The urinary proteome varies in normal and abnormal conditions. Different techniques are employed for the analysis of pediatric urinary proteome, the commonest being MS. Before introduction into clinical use, there is the need for careful standardization. Available data suggest that there are differences in urinary proteome between adult and pediatric populations. It is noted that infant urine contains proteins involved in translation and transcription, cellular growth, and metabolic processes, which are not predominant in adult urine. Available data on urinary proteomic and metabolomic profile in common pediatric disorders are also reviewed here.
引用
收藏
页码:482 / 489
页数:8
相关论文
共 69 条
[1]   The human urinary proteome contains more than 1500 proteins, including a large proportion of membrane proteins [J].
Adachi, Jun ;
Kumar, Chanchal ;
Zhang, Yanling ;
Olsen, Jesper V. ;
Mann, Matthias .
GENOME BIOLOGY, 2006, 7 (09)
[2]   Quantification of N-acetylaspartic acid in urine by LC-MS/MS for the diagnosis of Canavan disease [J].
Al-Dirbashi, O. Y. ;
Rashed, M. S. ;
Al-Qahtani, K. ;
Al-Mokhadab, M. A. ;
Kurdi, W. ;
Al-Sayed, M. A. A. .
JOURNAL OF INHERITED METABOLIC DISEASE, 2007, 30 (04) :612-612
[3]   Plasma and urine proteomic profiles in childhood idiopathic nephrotic syndrome [J].
Andersen, Rene Frydensbjerg ;
Palmfeldt, Johan ;
Jespersen, Bente ;
Gregersen, Niels ;
Rittig, Soren .
PROTEOMICS CLINICAL APPLICATIONS, 2012, 6 (7-8) :382-393
[4]   Efficient analysis of urinary glycosaminoglycans by LC-MS/MS in mucopolysaccharidoses type I, II and VI [J].
Auray-Blais, Christiane ;
Bherer, Patrick ;
Gagnon, Rene ;
Young, Sarah P. ;
Zhang, Haoyue H. ;
An, Yan ;
Clarke, Joe T. R. ;
Millington, David S. .
MOLECULAR GENETICS AND METABOLISM, 2011, 102 (01) :49-56
[5]   How well does urinary lyso-Gb3 function as a biomarker in Fabry disease? [J].
Auray-Blais, Christiane ;
Ntwari, Aime ;
Clarke, Joe T. R. ;
Warnock, David G. ;
Oliveira, Joao Paulo ;
Young, Sarah P. ;
Millington, David S. ;
Bichet, Daniel G. ;
Sirrs, Sandra ;
West, Michael L. ;
Casey, Robin ;
Hwu, Wuh-Liang ;
Keutzer, Joan M. ;
Zhang, X. Kate ;
Gagnon, Rene .
CLINICA CHIMICA ACTA, 2010, 411 (23-24) :1906-1914
[6]   Plasma and urine metabolic fingerprinting of type 1 diabetic children [J].
Balderas, Claudia ;
Javier Ruperez, Francisco ;
Ibanez, Elena ;
Senorans, Javier ;
Guerrero-Fernandez, Julio ;
Gonzalez Casado, Isabel ;
Gracia-Bouthelier, Ricardo ;
Garcia, Antonia ;
Barbas, Coral .
ELECTROPHORESIS, 2013, 34 (19) :2882-2890
[7]   Differences in Trace Metal Concentrations (Co, Cu, Fe, Mn, Zn, Cd, and Ni) in Whole Blood, Plasma, and Urine of Obese and Nonobese Children [J].
Blazewicz, Anna ;
Klatka, Maria ;
Astel, Aleksander ;
Partyka, Malgorzata ;
Kocjan, Ryszard .
BIOLOGICAL TRACE ELEMENT RESEARCH, 2013, 155 (02) :190-200
[8]   2D-electrophoresis and the urine proteome map: Where do we stand? [J].
Candiano, Giovanni ;
Santucci, Laura ;
Petretto, Andrea ;
Bruschi, Maurizio ;
Dimuccio, Veronica ;
Urbani, Andrea ;
Bagnasco, Serena ;
Ghiggeri, Gian Marco .
JOURNAL OF PROTEOMICS, 2010, 73 (05) :829-844
[9]   Elevation of urinary globotriaosylceramide (GL3) in infants with Fabry disease [J].
Chien, Yin-Hsiu ;
Olivova, Petra ;
Zhang, Xiaokui Kate ;
Chiang, Shu-Chuan ;
Lee, Ni-Chung ;
Keutzer, Joan ;
Hwu, Wuh-Liang .
MOLECULAR GENETICS AND METABOLISM, 2011, 102 (01) :57-60
[10]   Urine in Clinical Proteomics [J].
Decramer, Stephane ;
de Peredo, Anne Gonzalez ;
Breuil, Benjamin ;
Mischak, Harald ;
Monsarrat, Bernard ;
Bascands, Jean-Loup ;
Schanstra, Joost P. .
MOLECULAR & CELLULAR PROTEOMICS, 2008, 7 (10) :1850-1862