Prognostic Signature of Osteosarcoma Based on 14 Autophagy-Related Genes

被引:14
作者
Qi, Wei [1 ]
Yan, Qian [2 ]
Lv, Ming [1 ]
Song, Delei [1 ]
Wang, Xianbin [3 ]
Tian, Kangsong [1 ]
机构
[1] Zibo Cent Hosp, Dept West Hosp Orthopaed Trauma, Zibo, Peoples R China
[2] Zibo Cent Hosp, Dept Informat Sect, Zibo, Peoples R China
[3] Zibo Cent Hosp, Dept Eastern Hosp Orthopaed Trauma, Zibo, Peoples R China
关键词
prognosis; risk score; osteosarcoma; autophagy-related genes; nomogram; CELL LUNG-CANCER; POOR-PROGNOSIS; SURVIVAL-DATA; UP-REGULATION; C-MYC; EXPRESSION; PROMOTES; BNIP3; PROLIFERATION; INVASION;
D O I
10.3389/pore.2021.1609782
中图分类号
R73 [肿瘤学];
学科分类号
100214 ;
摘要
Background: Osteosarcoma is a common malignancy of bone with inferior survival outcome. Autophagy can exert multifactorial influence on tumorigenesis and tumor progression. However, the specific function of genes related to autophagy in the prognosis of osteosarcoma patients remains unclear. Herein, we aimed to explore the association of genes related to autophagy with the survival outcome of osteosarcoma patients. Methods: The autophagy-associated genes that were related to the prognosis of osteosarcoma were optimized by LASSO Cox regression analysis. The survival of osteosarcoma patients was forecasted by multivariate Cox regression analysis. The immune infiltration status of 22 immune cell types in osteosarcoma patients with high and low risk scores was compared by using the CIBERSORT tool. Results: The risk score model constructed according to 14 autophagy-related genes (ATG4A, BAK1, BNIP3, CALCOCO2, CCL2, DAPK1, EGFR, FAS, GRID2, ITGA3, MYC, RAB33B, USP10, and WIPI1) could effectively predict the prognosis of patients with osteosarcoma. A nomogram model was established based on risk score and metastasis. Conclusion: Autophagy-related genes were identified as pivotal prognostic signatures, which could guide the clinical decision making in the treatment of osteosarcoma.
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页数:14
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共 90 条
[1]   Homozygous GRID2 missense mutation predicts a shift in the D-serine binding domain of GluD2 in a case with generalized brain atrophy and unusual clinical features [J].
Ali, Zafar ;
Zulfiqar, Shumaila ;
Klar, Joakim ;
Wikstrom, Johan ;
Ullah, Farid ;
Khan, Ayaz ;
Abdullah, Uzma ;
Baig, Shahid ;
Dahl, Niklas .
BMC MEDICAL GENETICS, 2017, 18
[2]  
Allison Daniel C., 2012, Sarcoma, V2012, P704872, DOI 10.1155/2012/704872
[3]   Inflammatory Monocytes Promote Perineural Invasion via CCL2-Mediated Recruitment and Cathepsin B Expression [J].
Bakst, Richard L. ;
Xiong, Huizhong ;
Chen, Chun-Hao ;
Deborde, Sylvie ;
Lyubchik, Anna ;
Zhou, Yi ;
He, Shizhi ;
McNamara, William ;
Lee, Sei-Young ;
Olson, Oakley C. ;
Leiner, Ingrid M. ;
Marcadis, Andrea R. ;
Keith, James W. ;
Al-Ahmadie, Hikmat A. ;
Katabi, Nora ;
Gil, Ziv ;
Vakiani, Efsevia ;
Joyce, Johanna A. ;
Pamer, Eric ;
Wong, Richard J. .
CANCER RESEARCH, 2017, 77 (22) :6400-6414
[4]   Proteomic and Functional Investigation of the Colon Cancer Relapse-Associated Genes NOX4 and ITGA3 [J].
Bauer, Kerry M. ;
Watts, Tanya N. ;
Buechler, Steven ;
Hummon, Amanda B. .
JOURNAL OF PROTEOME RESEARCH, 2014, 13 (11) :4910-4918
[5]  
Bebenek M, 2006, MED SCI MONITOR, V12, pCR457
[6]   Tumor-Infiltrating Macrophages Are Associated with Metastasis Suppression in High-Grade Osteosarcoma: A Rationale for Treatment with Macrophage Activating Agents [J].
Buddingh, Emilie P. ;
Kuijjer, Marieke L. ;
Duim, Ronald A. J. ;
Buerger, Horst ;
Agelopoulos, Konstantin ;
Myklebost, Ola ;
Serra, Massimo ;
Mertens, Fredrik ;
Hogendoorn, Pancras C. W. ;
Lankester, Arjan C. ;
Cleton-Jansen, Anne-Marie .
CLINICAL CANCER RESEARCH, 2011, 17 (08) :2110-2119
[7]   Acetyl-coenzyme A acyltransferase 2 attenuates the apoptotic effects of BNIP3 in two human cell lines [J].
Cao, Wei ;
Liu, Nansong ;
Tang, Shuai ;
Bao, Lei ;
Shen, Li ;
Yuan, Hanying ;
Zhao, Xin ;
Lu, Hong .
BIOCHIMICA ET BIOPHYSICA ACTA-GENERAL SUBJECTS, 2008, 1780 (06) :873-880
[8]   In situ increased chemokine expression in human cervical intraepithelial neoplasia [J].
Carrero, Yenddy ;
Mosquera, Jesus ;
Callejas, Diana ;
Alvarez-Mon, Melchor .
PATHOLOGY RESEARCH AND PRACTICE, 2015, 211 (04) :281-285
[9]   Monocyte chemotactic protein-1 promotes the proliferation and invasion of osteosarcoma cells and upregulates the expression of AKT [J].
Chen, Quanchi ;
Sun, Wei ;
Liao, Yuxin ;
Zeng, Hui ;
Shan, Liancheng ;
Yin, Fei ;
Wang, Zhuoying ;
Zhou, Zifei ;
Hua, Yingqi ;
Cai, Zhengdong .
MOLECULAR MEDICINE REPORTS, 2015, 12 (01) :219-225
[10]   Tumor infiltrating immune cells (TIICs) as a biomarker for prognosis benefits in patients with osteosarcoma [J].
Chen, Ying ;
Zhao, Bo ;
Wang, Xiaohu .
BMC CANCER, 2020, 20 (01)