Opportunities for natural products in 21st century antibiotic discovery

被引:253
作者
Wright, Gerard D. [1 ]
机构
[1] McMaster Univ, MG DeGroote Inst Infect Dis Res, Dept Biochem & Biomed Sci, DeGroote Sch Med, 1280 Main St West, Hamilton, ON L8N 4K1, Canada
基金
加拿大健康研究院; 加拿大自然科学与工程研究理事会;
关键词
WALL TEICHOIC-ACID; GENE-CLUSTER; ANTIBACTERIAL COMPOUNDS; KLEBSIELLA-PNEUMONIAE; INHIBITORS; IDENTIFICATION; BIOSYNTHESIS; COMBINATIONS; POLYKETIDE; RESISTANCE;
D O I
10.1039/c7np00019g
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Natural products and their derivatives are mainstays of our antibiotic drugs, but they are increasingly in peril. The combination of widespread multidrug resistance in once susceptible bacterial pathogens, disenchantment with natural products as sources of new drugs, lack of success using synthetic compounds and target-based discovery methods, along with shifting economic and regulatory issues, conspire to move investment in research and development away from the antibiotics arena. The result is a growing crisis in antibiotic drug discovery that threatens modern medicine. 21st century natural product research is perfectly positioned to fill the antibiotic discovery gap and bring new drug candidates to the clinic. Innovations in genomics and techniques to explore new sources of antimicrobial chemical matter are revealing new chemistry. Increasing appreciation of the value of narrow-spectrum drugs and re-examination of once discarded chemical scaffolds coupled with synthetic biology methods to generate new compounds and improve yields offer new strategies to revitalize once moribund natural product programs. The increasing awareness that the combination of antibiotics with adjuvants, non-antibiotic compounds that overcome resistance and enhance drug activity, can rescue older chemical scaffolds, and concepts such as blocking pathogen virulence present orthogonal strategies to traditional antibiotics. In all these areas, natural products offer chemical matter, shaped by natural selection, that is privileged in this therapeutic area. Natural product research is poised to regain prominence in delivering new drugs to solve the antibiotic crisis.
引用
收藏
页码:694 / 701
页数:8
相关论文
共 57 条
[41]   Transmission of Extensively Drug-Resistant Tuberculosis in South Africa [J].
Shah, N. Sarita ;
Auld, Sara C. ;
Brust, James C. M. ;
Mathema, Barun ;
Ismail, Nazir ;
Moodley, Pravi ;
Mlisana, Koleka ;
Allana, Salim ;
Campbell, Angela ;
Mthiyane, Thuli ;
Morris, Natashia ;
Mpangase, Primrose ;
van der Meulen, Hermina ;
Omar, Shaheed V. ;
Brown, Tyler S. ;
Narechania, Apurva ;
Shaskina, Elena ;
Kapwata, Thandi ;
Kreiswirth, Barry ;
Gandhi, Neel R. .
NEW ENGLAND JOURNAL OF MEDICINE, 2017, 376 (03) :243-253
[42]   A Gestalt approach to Gram-negative entry [J].
Silver, Lynn L. .
BIOORGANIC & MEDICINAL CHEMISTRY, 2016, 24 (24) :6379-6389
[43]   Structural insight into the self-sacrifice mechanism of enediyne resistance [J].
Singh, Shanteri ;
Hager, Martin H. ;
Zhang, Changsheng ;
Griffith, Byron R. ;
Lee, Min S. ;
Hallenga, Klaas ;
Markley, John L. ;
Thorson, Jon S. .
ACS CHEMICAL BIOLOGY, 2006, 1 (07) :451-460
[44]   Cold Stress Makes Escherichia coli Susceptible to Glycopeptide Antibiotics by Altering Outer Membrane Integrity [J].
Stokes, Jonathan M. ;
French, Shawn ;
Ovchinnikova, Olga G. ;
Bouwman, Catrien ;
Whitfield, Chris ;
Brown, Eric D. .
Cell Chemical Biology, 2016, 23 (02) :267-277
[45]   Small Molecule Inhibitors of Clostridium difficile Toxin B-Induced Cellular Damage [J].
Tam, John ;
Beilhartz, Greg L. ;
Auger, Anick ;
Gupta, Pulkit ;
Therien, Alex G. ;
Melnyk, Roman A. .
CHEMISTRY & BIOLOGY, 2015, 22 (02) :175-185
[46]   Identification of Thiotetronic Acid Antibiotic Biosynthetic Pathways by Target-directed Genome Mining [J].
Tang, Xiaoyu ;
Li, Jie ;
Millan-Aguinaga, Natalie ;
Zhang, Jia Jia ;
O'Neill, Ellis C. ;
Ugalde, Juan A. ;
Jensen, Paul R. ;
Mantovani, Simone M. ;
Moore, Bradley S. .
ACS CHEMICAL BIOLOGY, 2015, 10 (12) :2841-2849
[47]   Opportunities for Synthetic Biology in Antibiotics: Expanding Glycopeptide Chemical Diversity [J].
Thaker, Maulik N. ;
Wright, Gerard D. .
ACS SYNTHETIC BIOLOGY, 2015, 4 (03) :195-206
[48]   Identifying producers of antibacterial compounds by screening for antibiotic resistance [J].
Thaker, Maulik N. ;
Wang, Wenliang ;
Spanogiannopoulos, Peter ;
Waglechner, Nicholas ;
King, Andrew M. ;
Medina, Ricardo ;
Wright, Gerard D. .
NATURE BIOTECHNOLOGY, 2013, 31 (10) :922-+
[49]  
Tietz JI, 2017, NAT CHEM BIOL, V13, P470, DOI [10.1038/NCHEMBIO.2319, 10.1038/nchembio.2319]
[50]   Computational strategies for genome-based natural product discovery and engineering in fungi [J].
van der Lee, Theo A. J. ;
Medema, Marnix H. .
FUNGAL GENETICS AND BIOLOGY, 2016, 89 :29-36