A Multi-Task Learning Approach to Personalized Progression Modeling

被引:0
作者
Ghalwash, Mohamed [1 ]
Dow, Daby [1 ]
机构
[1] IBM Res, Ctr Computat Hlth, Yorktown Hts, NY 10598 USA
来源
2020 8TH IEEE INTERNATIONAL CONFERENCE ON HEALTHCARE INFORMATICS (ICHI 2020) | 2020年
关键词
personalization; progression modeling; multi-task; risk assessment; DISEASE PROGRESSION;
D O I
10.1109/ICHI48887.2020.9374391
中图分类号
TP18 [人工智能理论];
学科分类号
081104 ; 0812 ; 0835 ; 1405 ;
摘要
Modeling disease progression is an active area of research. Many computational methods for progression modeling have been developed but mostly at population levels. In this paper, we formulate a personalized disease progression modeling problem as a multi-task regression problem where the estimation of progression scores at different time points is defined as a learning task. We introduce a Personalized Progression Modeling (PPM) scheme as a novel way to estimate personalized trajectories of disease by jointly discovering clusters of similar patients while estimating disease progression scores. The approach is formulated as an optimization problem that can be solved using existing techniques. We present efficient algorithms for the PPM scheme, together with experimental results on both synthetic and real world healthcare data proving its analytical efficacy over other 4 baseline methods representing the current state of the art. On synthetic data, we showed that our algorithm achieves over 40% accuracy improvement over all the baselines. On the healthcare application PPM has a 4% accuracy improvement on average over the state-of-the-art baseline in predicting the viral infection progression.
引用
收藏
页码:92 / 100
页数:9
相关论文
共 29 条
[1]  
Chen J., 2011, P 17 ACM SIGKDD INT, P42
[2]   SMOOTHING PROXIMAL GRADIENT METHOD FOR GENERAL STRUCTURED SPARSE REGRESSION [J].
Chen, Xi ;
Lin, Qihang ;
Kim, Seyoung ;
Carbonell, Jaime G. ;
Xing, Eric P. .
ANNALS OF APPLIED STATISTICS, 2012, 6 (02) :719-752
[3]   An interior trust region approach for nonlinear minimization subject to bounds [J].
Coleman, TF ;
Li, YY .
SIAM JOURNAL ON OPTIMIZATION, 1996, 6 (02) :418-445
[4]   CLUSTER SEPARATION MEASURE [J].
DAVIES, DL ;
BOULDIN, DW .
IEEE TRANSACTIONS ON PATTERN ANALYSIS AND MACHINE INTELLIGENCE, 1979, 1 (02) :224-227
[5]   Clustering-Based Predictive Process Monitoring [J].
Di Francescomarino, Chiara ;
Dumas, Marlon ;
Maggi, Fabrizio Maria ;
Teinemaa, Irene .
IEEE TRANSACTIONS ON SERVICES COMPUTING, 2019, 12 (06) :896-909
[6]   Learning (predictive) risk scores in the presence of censoring due to interventions [J].
Dyagilev, Kirill ;
Saria, Suchi .
MACHINE LEARNING, 2016, 102 (03) :323-348
[7]   Clustering short time series gene expression data [J].
Ernst, J ;
Nau, GJ ;
Bar-Joseph, Z .
BIOINFORMATICS, 2005, 21 :I159-I168
[8]  
Futoma J., 2016, P 1 MACHINE LEARNING, P42
[9]  
Grover Srishti, 2018, Procedia Computer Science, V132, P1788, DOI 10.1016/j.procs.2018.05.154
[10]   TRANSMISSION OF THE COMMON COLD TO VOLUNTEERS UNDER CONTROLLED CONDITIONS .1. THE COMMON COLD AS A CLINICAL ENTITY [J].
JACKSON, GG ;
DOWLING, HF ;
SPIESMAN, IG ;
BOAND, AV .
ARCHIVES OF INTERNAL MEDICINE, 1958, 101 (02) :267-278