An accessible insight into genetic findings for transplantation recipients with suspected genetic kidney disease

被引:10
作者
Wang, Zhigang [1 ]
Xu, Hongen [2 ]
Xiang, Tianchao [3 ,4 ]
Liu, Danhua [2 ,5 ]
Xu, Fei [1 ]
Zhao, Lixiang [1 ]
Feng, Yonghua [1 ]
Xu, Linan [3 ,4 ]
Liu, Jialu [3 ,4 ]
Fang, Ye [3 ,4 ]
Liu, Huanfei [2 ]
Li, Ruijun [2 ]
Hu, Xinxin [2 ]
Guan, Jingyuan [2 ]
Liu, Longshan [6 ]
Feng, Guiwen [1 ]
Shen, Qian [3 ,4 ]
Xu, Hong [3 ,4 ]
Frishman, Dmitrij [7 ]
Tang, Wenxue [2 ,5 ,8 ]
Guo, Jiancheng [2 ,5 ,8 ]
Rao, Jia [3 ,4 ,9 ,10 ]
Shang, Wenjun [1 ]
机构
[1] Zhengzhou Univ, Affiliated Hosp 1, Dept Kidney Transplantat, Zhengzhou, Henan, Peoples R China
[2] Zhengzhou Univ, Acad Med Sci, Precis Med Ctr, Zhengzhou, Henan, Peoples R China
[3] Fudan Univ, Childrens Hosp, Dept Nephrol, Shanghai, Peoples R China
[4] Fudan Univ, Childrens Hosp, Shanghai Key Lab Birth Defect, Shanghai, Peoples R China
[5] Zhengzhou Univ, Affiliated Hosp 2, Zhengzhou, Henan, Peoples R China
[6] Sun Yat Sen Univ, Affiliated Hosp 1, Organ Transplant Ctr, Guangzhou, Peoples R China
[7] Tech Univ Munich, Dept Bioinformat, Freising Weihenstephan, Germany
[8] Zhengzhou Univ, Henan Inst Med & Pharmaceut Sci, Zhengzhou, Henan, Peoples R China
[9] Fudan Univ, Inst Brain Sci, State Key Lab Med Neurobiol, Shanghai, Peoples R China
[10] Fudan Univ, Sch Basic Med Sci, Shanghai, Peoples R China
基金
中国国家自然科学基金;
关键词
MEDICAL GENETICS; AMERICAN-COLLEGE; EXOME; MUTATION; OUTCOMES; GLI2;
D O I
10.1038/s41525-021-00219-3
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Determining the etiology of end-stage renal disease (ESRD) constitutes a great challenge in the context of renal transplantation. Evidence is lacking on the genetic findings for adult renal transplant recipients through exome sequencing (ES). Adult patients on kidney transplant waitlist were recruited from 2017 to 2019. Trio-ES was conducted for the families who had multiple affected individuals with nephropathy or clinical suspicion of a genetic kidney disease owing to early onset or extrarenal features. Pathogenic variants were confirmed in 62 from 115 families post sequencing for 421 individuals including 195 health family members as potential living donors. Seventeen distinct genetic disorders were identified confirming the priori diagnosis in 33 (28.7%) families, modified or reclassified the clinical diagnosis in 27 (23.5%) families, and established a diagnosis in two families with ESRD of unknown etiology. In 14.8% of the families, we detected promising variants of uncertain significance in candidate genes associated with renal development or renal disease. Furthermore, we reported the secondary findings of oncogenes in 4.4% of the patients and known single-nucleotide polymorphisms associated with pharmacokinetics in our cohort to predict the drug levels of tacrolimus and mycophenolate. The diagnostic utility of the genetic findings has provided new clinical insight in most families that help with preplanned renal transplantation.
引用
收藏
页数:9
相关论文
共 50 条
  • [1] Clinical Genetic Screening in Adult Patients with Kidney Disease
    Cocchi, Enrico
    Nestor, Jordan Gabriela
    Gharavi, Ali G.
    CLINICAL JOURNAL OF THE AMERICAN SOCIETY OF NEPHROLOGY, 2020, 15 (10): : 1497 - 1510
  • [2] Clinical Genetic Testing in Kidney Disease and Transplantation: Logistical, Ethical, Legal, and Social Considerations
    Schiff, Tamar
    CURRENT TRANSPLANTATION REPORTS, 2023, 10 (04) : 159 - 166
  • [3] Genetic testing for kidney disease of unknown etiology
    Hays, Thomas
    Groopman, Emily E.
    Gharavi, Ali G.
    KIDNEY INTERNATIONAL, 2020, 98 (03) : 590 - 600
  • [4] Preimplantation Genetic Testing for Monogenic Kidney Disease
    Snoek, Rozemarijn
    Stokman, Marijn F.
    Lichtenbelt, Klaske D.
    van Tilborg, Theodora C.
    Simcox, Cindy E.
    Paulussen, Aimee D. C.
    Dreesen, Jos C. M. F.
    van Reekum, Franka
    Lely, A. Titia
    Knoers, Nine V. A. M.
    de Die-Smulders, Christine E. M.
    van Eerde, Albertien M.
    CLINICAL JOURNAL OF THE AMERICAN SOCIETY OF NEPHROLOGY, 2020, 15 (09): : 1279 - 1286
  • [5] Clinical Applications of Genetic Discoveries in Kidney Transplantation: a Review
    Marin, Ethan P.
    Cohen, Elizabeth
    Dahl, Neera
    KIDNEY360, 2020, 1 (04): : 300 - 305
  • [6] Developing a genetic testing panel for evaluation of morbidities in kidney transplant recipients
    Ma, Becky M.
    Elefant, Naama
    Tedesco, Martina
    Bogyo, Kelsie
    Vena, Natalie
    Murthy, Sarath K.
    Bheda, Shiraz A.
    Yang, Sandy
    Tomar, Nikita
    Zhang, Jun Y.
    Husain, Syed Ali
    Mohan, Sumit
    Kiryluk, Krzysztof
    Rasouly, Hila Milo
    Gharavi, Ali G.
    KIDNEY INTERNATIONAL, 2024, 106 (01) : 115 - 125
  • [7] Genetic testing in the diagnosis of chronic kidney disease: recommendations for clinical practice
    Knoers, Nine
    Antignac, Corinne
    Bergmann, Carsten
    Dahan, Karin
    Giglio, Sabrina
    Heidet, Laurence
    Lipska-Zietkiewicz, Beata S.
    Noris, Marina
    Remuzzi, Giuseppe
    Vargas-Poussou, Rosa
    Schaefer, Franz
    NEPHROLOGY DIALYSIS TRANSPLANTATION, 2022, 37 (02) : 239 - 254
  • [8] Using Genetic and Species Diversity to Tackle Kidney Disease
    Garrett, Michael R.
    Korstanje, Ron
    TRENDS IN GENETICS, 2020, 36 (07) : 499 - 509
  • [9] Evaluation of Genetic Kidney Diseases in Living Donor Kidney Transplantation: Towards Precision Genomic Medicine in Donor Risk Assessment
    Caliskan, Yasar
    Lee, Brian
    Whelan, Adrian M.
    Abualrub, Fadee
    Lentine, Krista L.
    Jittirat, Arksarapuk
    CURRENT TRANSPLANTATION REPORTS, 2022, 9 (02) : 127 - 142
  • [10] Outcome of genetic evaluation of patients with kidney cancer referred for suspected hereditary cancer syndromes
    Stratton, Kelly L.
    Alanee, Shaheen
    Glogowski, Emily A.
    Schrader, Kasmintan A.
    Rau-Murthy, Rohini
    Klein, Robert
    Russo, Paul
    Coleman, Jonathan
    Offit, Kenneth
    UROLOGIC ONCOLOGY-SEMINARS AND ORIGINAL INVESTIGATIONS, 2016, 34 (05) : 238.e1 - 238.e7