TARGETING SERPINS IN HIGH-THROUGHPUT AND STRUCTURE-BASED DRUG DESIGN

被引:11
作者
Chang, Yi-Pin [1 ]
Mahadeva, Ravi [2 ,3 ]
Patschull, Anathe O. M. [4 ]
Nobeli, Irene [4 ]
Ekeowa, Ugo I. [5 ]
McKay, Adam R. [6 ]
Thalassinos, Konstantinos [6 ]
Irving, James A. [5 ]
Haq, Imran [5 ]
Nyon, Mun Peak [4 ]
Christodoulou, John [6 ]
Ordonez, Adriana [5 ]
Miranda, Elena [7 ]
Gooptu, Bibek [4 ]
机构
[1] Univ Oxford, Dept Chem, Chem Res Lab, Oxford, England
[2] Univ Cambridge, Addenbrookes Hosp, Div Resp Med, Sch Clin Med,Dept Med, Cambridge CB2 2QQ, England
[3] Univ Cambridge, Papworth Hosp, Div Resp Med, Sch Clin Med,Dept Med, Cambridge CB2 2QQ, England
[4] Birkbeck Coll, Dept Biol Sci, ISMB Birkbeck, London, England
[5] Univ Cambridge, Dept Med, Cambridge Inst Med Res, Cambridge CB2 2QQ, England
[6] UCL, Res Dept Struct & Mol Biol, ISMB UCL, London, England
[7] Univ Roma La Sapienza, Dipartimento Biol & Biotecnol Charles Darwin, Rome, Italy
来源
METHODS IN ENZYMOLOGY, VOL 501: SERPIN STRUCTURE AND EVOLUTION | 2011年 / 501卷
关键词
PROTEIN-LIGAND INTERACTIONS; MASS-SPECTROMETRY; REACTIVE-LOOP; ANGSTROM STRUCTURE; SCORING FUNCTION; BINDING-AFFINITY; LIVER-INJURY; DOCKING; NMR; MUTANT;
D O I
10.1016/B978-0-12-385950-1.00008-0
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Native, metastable serpins inherently tend to undergo stabilizing conformational transitions in mechanisms of health (e.g., enzyme inhibition) and disease (serpinopathies). This intrinsic tendency is modifiable by ligand binding, thus structure-based drug design is an attractive strategy in the serpinopathies. This can be viewed as a labor-intensive approach, and historically, its intellectual attractiveness has been tempered by relatively limited success in development of drugs reaching clinical practice. However, the increasing availability of a range of powerful experimental systems and higher-throughput techniques is causing academic and early-stage industrial pharmaceutical approaches to converge. In this review, we outline the different systems and techniques that are bridging the gap between what have traditionally been considered distinct disciplines. The individual methods are not serpin-specific. Indeed, many have only recently been applied to serpins, and thus investigators in other fields may have greater experience of their use to date. However, by presenting examples from our work and that of other investigators in the serpin field, we highlight how techniques with potential for automation and scaling can be combined to address a range of context-specific challenges in targeting the serpinopathies.
引用
收藏
页码:139 / 175
页数:37
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