Space curvature-inspired nanoplasmonic sensor for breast cancer extracellular vesicle fingerprinting and machine learning classification

被引:14
作者
Kazemzadeh, Mohammadrahim [1 ,2 ]
Hisey, Colin L. [3 ,4 ]
Artuyants, Anastasiia [3 ,4 ]
Blenkiron, Cherie [5 ,6 ]
Chamley, Lawrence W. [3 ,4 ]
Zargar-Shoshtari, Kamran [7 ]
Xu, Weiliang [1 ,2 ]
Broderick, Neil G. R. [2 ,8 ]
机构
[1] Univ Auckland, Dept Mech Engn, Auckland 1010, New Zealand
[2] Dodd Walls Ctr Photon & Quantum Technol, Auckland, New Zealand
[3] Univ Auckland, Dept Obstet & Gynaecol, Auckland 1023, New Zealand
[4] Univ Auckland, Hub Extracellular Vesicle Invest, Auckland 1023, New Zealand
[5] Univ Auckland, Dept Mol Med & Pathol, Auckland 1023, New Zealand
[6] Univ Auckland, Auckland Canc Soc Res Ctr, Auckland 1023, New Zealand
[7] Univ Auckland, Dept Surg, Auckland 1023, New Zealand
[8] Univ Auckland, Dept Phys, Auckland 1010, New Zealand
关键词
RAMAN-SPECTROSCOPY; SERS ANALYSIS; TRANSFORMATION OPTICS; EXOSOMES; SUBSTRATE; DESIGN;
D O I
10.1364/BOE.428302
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Extracellular vesicles (EVs) are micro and nanoscale lipid-enclosed packages that have shown potential as liquid biopsy targets for cancer because their structure and contents reflect their cell of origin. However, progress towards the clinical applications of EVs has been hindered due to the low abundance of disease-specific EVs compared to EVs from healthy cells; such applications thus require highly sensitive and adaptable characterization tools. To address this obstacle, we designed and fabricated a novel space curvature-inspired surfaced-enhanced Raman spectroscopy (SERS) substrate and tested its capabilities using bioreactor-produced and size exclusion chromatography-purified breast cancer EVs of three different subtypes. Our findings demonstrate the platform's ability to effectively fingerprint and efficiently classify, for the first time, three distinct subtypes of breast cancer EVs following the application of machine learning algorithms on the acquired spectra. This platform and characterization approach will enhance the viability of EVs and nanoplasmonic sensors towards clinical utility for breast cancer and many other applications to improve human health. (C) 2021 Optical Society of America under the terms of the OSA Open Access Publishing Agreement
引用
收藏
页码:3965 / 3981
页数:17
相关论文
共 56 条
[51]   A Label-Free Platform for Identification of Exosomes from Different Sources [J].
Yan, Zhongbo ;
Dutta, Suman ;
Liu, Zirui ;
Yu, Xinke ;
Mesgarzadeh, Neda ;
Ji, Feng ;
Bitan, Gal ;
Xie, Ya-Hong .
ACS SENSORS, 2019, 4 (02) :488-497
[52]   Distinguishing breast cancer cells using surface-enhanced Raman scattering [J].
Yang, Jing ;
Wang, Zhuyuan ;
Zong, Shenfei ;
Song, Chunyuan ;
Zhang, Ruohu ;
Cui, Yiping .
ANALYTICAL AND BIOANALYTICAL CHEMISTRY, 2012, 402 (03) :1093-1100
[53]   COUPLED-MODE THEORY FOR GUIDED-WAVE OPTICS [J].
YARIV, A .
IEEE JOURNAL OF QUANTUM ELECTRONICS, 1973, QE 9 (09) :919-933
[54]   Recent advances in surface-enhanced raman spectroscopy (SERS): Finite-difference time-domain (FDTD) method for SERS and sensing applications [J].
Zeng, Zheng ;
Liu, Yiyang ;
Wei, Jianjun .
TRAC-TRENDS IN ANALYTICAL CHEMISTRY, 2016, 75 :162-173
[55]   Label-Free Exosomal Detection and Classification in Rapid Discriminating Different Cancer Types Based on Specific Raman Phenotypes and Multivariate Statistical Analysis [J].
Zhang, Ping ;
Wang, Limin ;
Fang, Yaping ;
Zheng, Dawei ;
Lin, Taifeng ;
Wang, Huiqin .
MOLECULES, 2019, 24 (16)
[56]   Facile detection of tumor-derived exosomes using magnetic nanobeads and SERS nanoprobes [J].
Zong, Shenfei ;
Wang, Le ;
Chen, Chen ;
Lu, Ju ;
Zhu, Dan ;
Zhang, Yizhi ;
Wang, Zhuyuan ;
Cui, Yiping .
ANALYTICAL METHODS, 2016, 8 (25) :5001-5008