Label-free detection of nasopharyngeal and liver cancer using surface-enhanced Raman spectroscopy and partial ease squares combined with support vector machine

被引:74
作者
Yu, Yun [1 ,2 ]
Lin, Yating [1 ]
Xu, Chaoxian [1 ]
Lin, Kecan [3 ]
Ye, Qing [4 ]
Wang, Xiaoyan [4 ]
Xie, Shusen [1 ]
Chen, Rong [1 ]
Lin, Juqiang [1 ]
机构
[1] Fujian Normal Univ, Minist Educ, Key Lab OptoElect Sci & Technol Med, Fuzhou, Fujian, Peoples R China
[2] Fujian Univ Tradit Chinese Med, Coll Integrated Tradit Chinese & Western Med, Fuzhou, Fujian, Peoples R China
[3] Fujian Med Univ, Affiliated Hosp 1, Liver Dis Ctr, Fuzhou 350005, Fujian, Peoples R China
[4] Fujian Med Univ, Fujian Prov Hosp, Prov Clin Coll, Dept Otolaryngol, Fuzhou 350001, Fujian, Peoples R China
基金
中国国家自然科学基金;
关键词
PARTIAL LEAST-SQUARES; SERUM; PLS; REGRESSION; DIAGNOSIS;
D O I
10.1364/BOE.9.006053
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
In this paper, we investigated the feasibility of using surface enhanced Raman spectroscopy (SERS) and multivariate analysis method to discriminate liver cancer and nasopharyngeal cancer from healthy volunteers. SERS measurements were performed on serum protein samples from 104 liver cancer patients, 100 nasopharyngeal cancer patients. and 95 healthy volunteers. Two dimensionality reduction methods, principal component analysis (PCA) and partial least square (PLS) were compared, and the results indicated that the performance of PLS is superior to that of PCA. When the number of components was compressed to 3 by PLS, support vector machine (SVM) with a Gaussian radial basis function (RBF) was employed to classify various cancers simultaneously. Based on the PLS-SVM algorithm, high diagnostic accuracies of 95.09% and 90.67% were achieved from the training set and the unknown testing set, respectively. The results of this exploratory work demonstrate that serum protein SERS technology combined with PLS-SVM diagnostic algorithm has great potential for the noninvasive screening of cancer. (C) 2018 Optical Society of America under the terms of the OSA Open Access Publishing Agreement
引用
收藏
页码:6053 / 6066
页数:14
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