A cerebrospinal fluid microRNA signature as biomarker for glioblastoma

被引:104
作者
Akers, Johnny C. [1 ]
Hua, Wei [2 ]
Li, Hongying [3 ]
Ramakrishnan, Valya [1 ]
Yang, Zixiao [2 ]
Quan, Kai [2 ]
Zhu, Wei [2 ]
Li, Jie [1 ]
Figueroa, Javier [1 ]
Hirshman, Brian R. [1 ]
Miller, Brittney [1 ]
Piccioni, David [4 ]
Ringel, Florian [5 ]
Komotar, Ricardo [6 ]
Messer, Karen [3 ]
Galasko, Douglas R. [7 ]
Hochberg, Fred [1 ]
Mao, Ying [7 ,8 ]
Carter, Bob S. [1 ]
Chen, Clark C. [1 ]
机构
[1] Univ Calif San Diego, Ctr Theoret & Appl Neurooncol, San Diego, CA 92103 USA
[2] Fudan Univ, Huashan Hosp, Dept Neurosurg, Shanghai, Peoples R China
[3] UC San Diego Hlth Syst, Moores Canc Ctr, Biostat Dept, La Jolla, CA USA
[4] UC San Diego Hlth Syst, Moores Canc Ctr, Dept Neurosurg, La Jolla, CA USA
[5] Tech Univ Munich, Klinikum Rechts Isar, Dept Neurosurg, Munich, Germany
[6] Univ Miami, Miller Sch Med, Dept Neurol Surg, Miami, FL 33136 USA
[7] Univ Calif San Diego, Dept Neurosci, San Diego, CA 92103 USA
[8] Fudan Univ, Inst Brain Sci, Collaborat Innovat Ctr Brain Sci, State Key Lab Med Neurobiol, Shanghai, Peoples R China
关键词
extracellular vesicle; CSF; liquid biopsy; EXOSOMES; BIOPSY; DIAGNOSIS; RESECTION; MIRNAS; LUMBAR; BRAIN; SET;
D O I
10.18632/oncotarget.18332
中图分类号
R73 [肿瘤学];
学科分类号
100214 ;
摘要
Purpose: To develop a cerebrospinal fluid (CSF) miRNA diagnostic biomarker for glioblastoma. Experimental Design: Glioblastoma tissue and matched CSF from the same patient (obtained prior to tumor manipulation) were profiled by TaqMan OpenArray (R) Human MicroRNA Panel. CSF miRNA profiles from glioblastoma patients and controls were created from three discovery cohorts and confirmed in two validation cohorts. Results: miRNA profiles from clinical CSF correlated with those found in glioblastoma tissues. Comparison of CSF miRNA profiles between glioblastoma patients and non-brain tumor patients yielded a tumor "signature" consisting of nine miRNAs. The " signature" correlated with glioblastoma tumor volume (p=0.008). When prospectively applied to cisternal CSF, the sensitivity and specificity of the 'signature' for glioblastoma detection were 67% and 80%, respectively. For lumbar CSF, the sensitivity and specificity of the signature were 28% and 95%, respectively. Comparable results were obtained from analyses of CSF extracellular vesicles (EVs) and crude CSF. Conclusion: We report a CSF miRNA signature as a "liquid biopsy" diagnostic platform for glioblastoma.
引用
收藏
页码:68769 / 68779
页数:11
相关论文
共 40 条
  • [1] Comparing the risks of frameless stereotactic biopsy in eloquent and noneloquent regions of the brain: a retrospective review of 284 cases Clinical article
    Air, Ellen L.
    Leach, James L.
    Warnick, Ronald E.
    McPherson, Christopher M.
    [J]. JOURNAL OF NEUROSURGERY, 2009, 111 (04) : 820 - 824
  • [2] Optimizing preservation of extracellular vesicular miRNAs derived from clinical cerebrospinal fluid
    Akers, Johnny C.
    Ramakrishnan, Valya
    Yang, Isaac
    Hua, Wei
    Mao, Ying
    Carter, Bob S.
    Chen, Clark C.
    [J]. CANCER BIOMARKERS, 2016, 17 (02) : 125 - 132
  • [3] Comparative Analysis of Technologies for Quantifying Extracellular Vesicles (EVs) in Clinical Cerebrospinal Fluids (CSF)
    Akers, Johnny C.
    Ramakrishnan, Valya
    Nolan, John P.
    Duggan, Erika
    Fu, Chia-Chun
    Hochberg, Fred H.
    Chen, Clark C.
    Carter, Bob S.
    [J]. PLOS ONE, 2016, 11 (02):
  • [4] miR-21 in the Extracellular Vesicles (EVs) of Cerebrospinal Fluid (CSF): A Platform for Glioblastoma Biomarker Development
    Akers, Johnny C.
    Ramakrishnan, Valya
    Kim, Ryan
    Skog, Johan
    Nakano, Ichiro
    Pingle, Sandeep
    Kalinina, Juliya
    Hua, Wei
    Kesari, Santosh
    Mao, Ying
    Breakefield, Xandra O.
    Hochberg, Fred H.
    Van Meir, Erwin G.
    Carter, Bob S.
    Chen, Clark C.
    [J]. PLOS ONE, 2013, 8 (10):
  • [5] VALUE OF CEREBROSPINAL-FLUID CYTOLOGY FOR DIAGNOSIS OF MALIGNANCIES IN CENTRAL NERVOUS-SYSTEM
    BALHUIZEN, JC
    BOTS, GTAM
    SCHABERG, A
    BOSMAN, FT
    [J]. JOURNAL OF NEUROSURGERY, 1978, 48 (05) : 747 - 753
  • [6] Identification of microRNAs in the cerebrospinal fluid as biomarker for the diagnosis of glioma
    Baraniskin, Alexander
    Kuhnhenn, Jan
    Schlegel, Uwe
    Maghnouj, Abdelouahid
    Zoellner, Hannah
    Schmiegel, Wolf
    Hahn, Stephan
    Schroers, Roland
    [J]. NEURO-ONCOLOGY, 2012, 14 (01) : 29 - 33
  • [7] Key concepts in glioblastoma therapy
    Bartek, Jiri, Jr.
    Ng, Kimberly
    Bartek, Jiri
    Fischer, Walter
    Carter, Bob
    Chen, Clark C.
    [J]. JOURNAL OF NEUROLOGY NEUROSURGERY AND PSYCHIATRY, 2012, 83 (07) : 753 - 760
  • [8] Histological yield, complications, and technological considerations in 114 consecutive frameless stereotactic biopsy procedures aided by open intraoperative magnetic resonance imaging
    Bernays, RL
    Kollias, SS
    Khan, N
    Brandner, S
    Meier, S
    Yonekawa, Y
    [J]. JOURNAL OF NEUROSURGERY, 2002, 97 (02) : 354 - 362
  • [9] MicroRNA-21 is an antiapoptotic factor in human glioblastoma cells
    Chan, JA
    Krichevsky, AM
    Kosik, KS
    [J]. CANCER RESEARCH, 2005, 65 (14) : 6029 - 6033
  • [10] Comprehensive genomic characterization defines human glioblastoma genes and core pathways
    Chin, L.
    Meyerson, M.
    Aldape, K.
    Bigner, D.
    Mikkelsen, T.
    VandenBerg, S.
    Kahn, A.
    Penny, R.
    Ferguson, M. L.
    Gerhard, D. S.
    Getz, G.
    Brennan, C.
    Taylor, B. S.
    Winckler, W.
    Park, P.
    Ladanyi, M.
    Hoadley, K. A.
    Verhaak, R. G. W.
    Hayes, D. N.
    Spellman, Paul T.
    Absher, D.
    Weir, B. A.
    Ding, L.
    Wheeler, D.
    Lawrence, M. S.
    Cibulskis, K.
    Mardis, E.
    Zhang, Jinghui
    Wilson, R. K.
    Donehower, L.
    Wheeler, D. A.
    Purdom, E.
    Wallis, J.
    Laird, P. W.
    Herman, J. G.
    Schuebel, K. E.
    Weisenberger, D. J.
    Baylin, S. B.
    Schultz, N.
    Yao, Jun
    Wiedemeyer, R.
    Weinstein, J.
    Sander, C.
    Gibbs, R. A.
    Gray, J.
    Kucherlapati, R.
    Lander, E. S.
    Myers, R. M.
    Perou, C. M.
    McLendon, Roger
    [J]. NATURE, 2008, 455 (7216) : 1061 - 1068