SWI/SNF complexes, chromatin remodeling and skeletal myogenesis: It's time to exchange!

被引:33
作者
Albini, Sonia [3 ]
Puri, Pier Lorenzo [1 ,2 ,3 ]
机构
[1] IRCCS Fdn Santa Lucia, DTI, I-00143 Rome, Italy
[2] European Brain Res Inst, I-00143 Rome, Italy
[3] Sanford Burnham Inst Med Res, La Jolla, CA 92037 USA
关键词
Skeletal myogenesis; Transcription; Chromatin; Epigenetics; SWI/SNF; MUSCLE GENE-EXPRESSION; MYOD; BINDING; PROTEIN; ATPASE; H3.3; BRG1; DNA; DIFFERENTIATION; ACTIVATION;
D O I
10.1016/j.yexcr.2010.05.023
中图分类号
R73 [肿瘤学];
学科分类号
100214 ;
摘要
Skeletal muscle differentiation relies on the coordinated activation and repression of specific subsets of genes. This reflects extensive changes in chromatin architecture, composition of chromatin-associated complexes and histone modifications at the promoter/enhancer elements of skeletal muscle genes. An early, key event in the activation of muscle-specific gene transcription is the disruption of the repressive conformation imposed by nucleosomes, which impede the access of pioneer transcription factors, such as the muscle-specific basic helix-loop-helix (bHLH) factors MyoD and Myf5, to their DNA-binding sites. This review focuses on our current understanding of the role of the SWI/SNF ATP-dependent chromatin-remodeling complex in the activation of the myogenic program, by inducing conformational changes permissive for muscle-gene expression. Recent findings suggest that specific combinations of individual SWI/SNF components can generate sub-complexes with specialized functions that are engaged at sequential stages of muscle-gene activation - e.g. initial displacement of the nucleosome followed by the loading of the complete myogenic transcriptosome that promotes gene transcription. SWI/SNF composition and function is regulated by the exchange of specific variants of structural sub-units. In turn, an exchange of histone variants and related epigenetic modifications might reflect the impact of distinct SWI/SNF complexes on the architecture and activity of target promoter/enhancer elements. Thus, the SWI/SNF complexes should be regarded not just as simple executors of the program imposed by transcription factors, but as multifaceted "readers" and "shapers" of the chromatin/DNA landscape within target muscle genes along the transition from myoblasts to myotubes.(C) 2010 Elsevier Inc. All rights reserved.
引用
收藏
页码:3073 / 3080
页数:8
相关论文
共 52 条
[1]   A Suv39h-dependent mechanism for silencing S-phase genes in differentiating but not in cycling cells [J].
Ait-Si-Ali, S ;
Guasconi, V ;
Fritsch, L ;
Yahi, H ;
Sekhri, R ;
Naguibneva, I ;
Robin, P ;
Cabon, F ;
Polesskaya, A ;
Harel-Bellan, A .
EMBO JOURNAL, 2004, 23 (03) :605-615
[2]   The histone variant macroH2A interferes with transcription factor binding and SWI/SNF nucleosome remodeling [J].
Angelov, D ;
Molla, A ;
Perche, PY ;
Hans, F ;
Côté, J ;
Khochbin, S ;
Bouvet, P ;
Dimitrov, S .
MOLECULAR CELL, 2003, 11 (04) :1033-1041
[3]   MyoD and the transcriptional control of myogenesis [J].
Berkes, CA ;
Tapscott, SJ .
SEMINARS IN CELL & DEVELOPMENTAL BIOLOGY, 2005, 16 (4-5) :585-595
[4]   Pbx marks genes for activation by MyoD indicating a role for a homeodomain protein in establishing myogenic potential [J].
Berkes, CA ;
Bergstrom, DA ;
Penn, BH ;
Seaver, KJ ;
Knoepfler, PS ;
Tapscott, SJ .
MOLECULAR CELL, 2004, 14 (04) :465-477
[5]   Highly flexible virtual reality system [J].
Blach, R ;
Landauer, J ;
Rosch, A ;
Simon, A .
FUTURE GENERATION COMPUTER SYSTEMS, 1998, 14 (3-4) :167-178
[6]   An initial blueprint for myogenic differentiation [J].
Blais, A ;
Tsikitis, M ;
Acosta-Alvear, D ;
Sharan, R ;
Kluger, Y ;
Dynlacht, BD .
GENES & DEVELOPMENT, 2005, 19 (05) :553-569
[7]   A Brg1 null mutation in the mouse reveals functional differences among mammalian SWI/SNF complexes [J].
Bultman, S ;
Gebuhr, T ;
Yee, D ;
La Mantia, C ;
Nicholson, J ;
Gilliam, A ;
Randazzo, F ;
Metzger, D ;
Chambon, P ;
Crabtree, G ;
Magnuson, T .
MOLECULAR CELL, 2000, 6 (06) :1287-1295
[8]   The logic of chromatin architecture and remodelling at promoters [J].
Cairns, Bradley R. .
NATURE, 2009, 461 (7261) :193-198
[9]   Global and gene-specific analyses show distinct roles for Myod and Myog at a common set of promoters [J].
Cao, Y ;
Kumar, RM ;
Penn, BH ;
Berkes, CA ;
Kooperberg, C ;
Boyer, LA ;
Young, RA ;
Tapscott, SJ .
EMBO JOURNAL, 2006, 25 (03) :502-511
[10]   Genome-wide MyoD Binding in Skeletal Muscle Cells: A Potential for Broad Cellular Reprogramming [J].
Cao, Yi ;
Yao, Zizhen ;
Sarkar, Deepayan ;
Lawrence, Michael ;
Sanchez, Gilson J. ;
Parker, Maura H. ;
MacQuarrie, Kyle L. ;
Davison, Jerry ;
Morgan, Martin T. ;
Ruzzo, Walter L. ;
Gentleman, Robert C. ;
Tapscott, Stephen J. .
DEVELOPMENTAL CELL, 2010, 18 (04) :662-674