Molecular systematics of the neotropical shovelnose catfish genus Pseudoplatystoma Bleeker 1862 based on nuclear and mtDNA markers

被引:30
作者
Carvalho-Costa, L. F. [1 ]
Piorski, N. M. [2 ]
Willis, S. C. [3 ]
Galetti, P. M., Jr. [4 ]
Orti, G. [5 ]
机构
[1] Univ Fed Maranhao, Ctr Agr & Environm Sci, Chapadinha, MA, Brazil
[2] Univ Fed Maranhao, Dept Oceanog & Limnol, Sao Luis, MA, Brazil
[3] Univ Nebraska, Sch Biol Sci, Lincoln, NE 68583 USA
[4] Univ Fed Sao Carlos, Dept Genet & Evolut, BR-13560 Sao Carlos, SP, Brazil
[5] George Washington Univ, Dept Biol Sci, Washington, DC 20052 USA
基金
巴西圣保罗研究基金会; 美国国家科学基金会;
关键词
Species tree; Coalescent analysis; Cytochrome b; Rag1; S7; Intron; HAPLOTYPE RECONSTRUCTION; STATISTICAL-METHOD; DNA; RECOMBINATION; POPULATIONS; COALESCENT; INFERENCE; TESTS;
D O I
10.1016/j.ympev.2011.02.005
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Pseudoplatystoma is a commercially important genus of Neotropical migratory catfishes widely distributed in all major river basins of South America. Historically, only three species were recognized, but a recent revision proposed eight putative morphospecies for the genus. A molecular study based on mitochondria DNA (mtDNA) provided support for recognition of only some of the species and raised questions about species boundaries in this group. We present a more encompassing analysis based on mtDNA (cytochrome b, 818 bp) and nuclear DNA-based phylogenies (Rag1 intron 1, 664 bp and 57 intron 1, 635 bp) for a more extensive sampling (279 individuals from 42 localities) of all putative species in all major river basins. Patterns generated by individual gene genealogies and a multispecies coalescent analysis provided evidence to suggest recognition of only four distinct species in this genus:Pseudoplatystoma magdaleniatum, Pseudoplatystoma corruscans, Pseudoplatystoma tigrimun (sensu lato) and Pseudoplatystoma fasciatum (sensu lato). The species phylogeny places P. magdaleniatum as the sister group to all the other species in the genus, but the relationships among P. fasciatum s.l. P. tigrimum s.l., and P. corruscans could not be resolved with confidence. (C) 2011 Elsevier Inc. All rights reserved.
引用
收藏
页码:177 / 194
页数:18
相关论文
共 48 条
[1]   Mitochondrial introgression is restricted relative to nuclear markers in a water strider (Hemiptera: Gerridae) hybrid zone [J].
Abe, TA ;
Spence, JR ;
Sperling, FAH .
CANADIAN JOURNAL OF ZOOLOGY, 2005, 83 (03) :432-444
[2]   Universal and rapid salt-extraction of high quality genomic DNA for PCR-based techniques [J].
Aljanabi, SM ;
Martinez, I .
NUCLEIC ACIDS RESEARCH, 1997, 25 (22) :4692-4693
[3]  
Armbruster Jonathan W., 2000, Ichthyological Exploration of Freshwaters, V11, P241
[4]  
Avise J. C., 2000, PHYLOGEOGRAPHY HIST, DOI DOI 10.2307/J.CTV1NZFGJ7
[5]  
Avise John C., 2004, P1
[6]  
Barthem R.B., 1997, CATFISH CONNECTION E
[7]  
BLEEKER P, 1862, AFDELING NATUURKUNDE, V14, P371
[8]  
Buitrago-Suarez Uriel Angel, 2006, Revista de la Academia Colombiana de Ciencias Exactas Fisicas y Naturales, V30, P117
[9]  
Buitrago-Suárez UA, 2007, ZOOTAXA, P1
[10]  
Burgess Warren E., 1989, P1