Structural basis for natural lactonase and promiscuous phosphotriesterase activities

被引:143
作者
Elias, Mikae [2 ,3 ]
Dupuy, Jerome [4 ]
Merone, Luigia [1 ,5 ]
Mandrich, Luigi [1 ,5 ]
Porzio, Elena [1 ,5 ]
Moniot, Sebastien [2 ]
Rochu, Daniel [6 ]
Lecomte, Claude [2 ]
Rossi, Mose [1 ,5 ]
Masson, Patrick [6 ]
Manco, Giuseppe [1 ,5 ]
Chabriere, Eric [2 ,3 ,6 ]
机构
[1] CNR, Ist Biochim Proteine, I-80131 Naples, Italy
[2] Univ Henri Poincare, CNRS, Lab Cristallog & Modelisat Mat Mineraux & Biol, F-54506 Nancy, France
[3] Univ Aix Marseille 2, CNRS, F-13288 Marseille, France
[4] Inst Biol Struct JP EBEL, Lab Cristallogenese & Cristallog Proteines, F-38027 Grenoble, France
[5] CNR, Ist Biochim Proteine, I-80131 Naples, Italy
[6] Ctr Rech Serv Sante Armees, Unite Enzymol, Dept Toxicol, F-38702 La Tronche, France
关键词
lactonase; phosphotriesterase; hyperthermophilic enzymes; 3D structure; active-site mutants;
D O I
10.1016/j.jmb.2008.04.022
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Organophosphates are the largest class of known insecticides, several of which are potent nerve agents. Consequently, organophosphate-degrading enzymes are of great scientific interest as bioscavengers and biodecontaminants. Recently, a hyperthermophilic phosphotriesterase (known as SsoPox), from the Archaeon Sulfolobus solfataricus, has been isolated and found to possess a very high lactonase activity. Here, we report the three-dimensional structures of SsoPox in the apo form (2.6 angstrom resolution) and in complex with a quorum-sensing lactone mimic at 2.0 angstrom resolution. The structure also reveals an unexpected active site topology, and a unique hydrophobic channel that perfectly accommodates the lactone substrate. Structural and mutagenesis evidence allows us to propose a mechanism for lactone hydrolysis and to refine the catalytic mechanism established for phosphotriesterases. In addition, SsoPox structures permit the correlation of experimental lactonase and phosphotriesterase activities and this strongly suggests lactonase activity as the cognate function of SsoPox. This example demonstrates that promiscuous activities probably constitute a large and efficient reservoir for the creation of novel catalytic activities. (C) 2008 Elsevier Ltd. All rights reserved.
引用
收藏
页码:1017 / 1028
页数:12
相关论文
共 35 条
  • [1] The latent promiscuity of newly identified microbial lactonases is linked to a recently diverged phosphotriesterase
    Afriat, Livnat
    Roodveldt, Cintia
    Manco, Giuseppe
    Tawfik, Dan S.
    [J]. BIOCHEMISTRY, 2006, 45 (46) : 13677 - 13686
  • [2] [Anonymous], ACTA CRYSTALLOGR D
  • [3] Mechanism for the hydrolysis of organophosphates by the bacterial phosphotriesterase
    Aubert, SD
    Li, YC
    Raushel, FM
    [J]. BIOCHEMISTRY, 2004, 43 (19) : 5707 - 5715
  • [4] High resolution X-ray structures of different metal-substituted forms of phosphotriesterase from Pseudomonas diminuta
    Benning, MM
    Shim, H
    Raushel, FM
    Holden, HM
    [J]. BIOCHEMISTRY, 2001, 40 (09) : 2712 - 2722
  • [5] A pH sensitive colorometric assay for the high-throughput screening of enzyme inhibitors and substrates: A case study using kinases
    Chapman, E
    Wong, CH
    [J]. BIOORGANIC & MEDICINAL CHEMISTRY, 2002, 10 (03) : 551 - 555
  • [6] Structural determinants of the substrate and stereochemical specificity of phosphotriesterase
    Chen-Goodspeed, M
    Sogorb, MA
    Wu, FY
    Hong, SB
    Raushel, FM
    [J]. BIOCHEMISTRY, 2001, 40 (05) : 1325 - 1331
  • [7] PURIFICATION AND PROPERTIES OF A HIGHLY-ACTIVE ORGANOPHOSPHORUS ACID ANHYDROLASE FROM ALTEROMONAS-UNDINA
    CHENG, TC
    HARVEY, SP
    STROUP, AN
    [J]. APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 1993, 59 (09) : 3138 - 3140
  • [8] Density modification for macromolecular phase improvement
    Cowtan, KD
    Zhang, KYJ
    [J]. PROGRESS IN BIOPHYSICS & MOLECULAR BIOLOGY, 1999, 72 (03) : 245 - 270
  • [9] Human paraoxonases (PON1, PON2, and PON3) are lactonases with overlapping and distinct substrate specificities
    Draganov, DI
    Teiber, JF
    Speelman, A
    Osawa, Y
    Sunahara, R
    La Du, BN
    [J]. JOURNAL OF LIPID RESEARCH, 2005, 46 (06) : 1239 - 1247
  • [10] Crystallization and preliminary X-ray diffraction analysis of the hyperthermophilic Sulfolobus solfataricus phosphotriesterase
    Elias, Mikael
    Dupuy, Jerome
    Merone, Luigia
    Lecomte, Claude
    Rossi, Mose
    Masson, Patrick
    Manco, Giuseppe
    Chabriere, Eric
    [J]. ACTA CRYSTALLOGRAPHICA SECTION F-STRUCTURAL BIOLOGY COMMUNICATIONS, 2007, 63 : 553 - 555