Optimal number of strong labels for curriculum learning with convolutional neural network to classify pulmonary abnormalities in chest radiographs

被引:10
作者
Cho, Yongwon [1 ]
Park, Beomhee [1 ]
Lee, Sang Min [2 ,3 ]
Lee, Kyung Hee [5 ]
Seo, Joon Beom [2 ,3 ]
Kim, Namkug [1 ,2 ,3 ,4 ]
机构
[1] Univ Ulsan, Asan Med Ctr, Dept Biomed Engn, Coll Med,Asan Med Inst Convergence Sci & Technol, 88 Olymp Ro 43 Gil, Seoul 05505, South Korea
[2] Univ Ulsan, Asan Med Ctr, Dept Radiol, Coll Med, 88 Olymp Ro 43 Gil, Seoul 05505, South Korea
[3] Univ Ulsan, Asan Med Ctr, Res Inst Radiol, Coll Med, 88 Olymp Ro 43 Gil, Seoul 05505, South Korea
[4] Univ Ulsan, Asan Med Ctr, Dept Convergence Med, Coll Med, 88 Olymp Ro 43 Gil, Seoul 05505, South Korea
[5] Seoul Natl Univ, Dept Radiol, Bundang Hosp, Seoul, South Korea
关键词
Abnormality detection; Chest radiographs; Class-activation map; Convolutional neural network; Curriculum learning; Deep learning; Multiple diseases; COMPUTER-AIDED DETECTION; LUNG-CANCER;
D O I
10.1016/j.compbiomed.2021.104750
中图分类号
Q [生物科学];
学科分类号
07 ; 0710 ; 09 ;
摘要
Background and objective: It is important to alleviate annotation efforts and costs by efficiently training on medical images. We performed a stress test on several strong labels for curriculum learning with a convolutional neural network to differentiate normal and five types of pulmonary abnormalities in chest radiograph images. Methods: The numbers of CXR images of healthy subjects and patients, acquired at Asan Medical Center (AMC), were 6069 and 3465, respectively. The numbers of CXR images of patients with nodules, consolidation, interstitial opacity, pleural effusion, and pneumothorax were 944, 550, 280, 1360, and 331, respectively. The AMC dataset was split into training, tuning, and test, with a ratio of 7:1:2. All lesions were strongly labeled by thoracic expert radiologists, with confirmation of the corresponding CT. For curriculum learning, normal and abnormal patches (N = 26658) were randomly extracted around the normal lung and strongly labeled abnormal lesions, respectively. In addition, 1%, 5%, 20%, 50%, and 100% of strong labels were used to determine an optimal number for them. Each patch dataset was trained with the ResNet-50 architecture, and all CXRs with weak labels were used for fine-tuning them in a transfer-learning manner. A dataset acquired from the Seoul National University Bundang Hospital (SNUBH) was used for external validation. Results: The detection accuracies of the 1%, 5%, 20%, 50%, and 100% datasets were 90.51, 92.15, 93.90, 94.54, and 95.39, respectively, in the AMC dataset and 90.01, 90.14, 90.97, 91.92, and 93.00 in the SNUBH dataset. Conclusions: Our results showed that curriculum learning with over 20% sampling rate for strong labels are sufficient to train a model with relatively high performance, which can be easily and efficiently developed in an actual clinical setting.
引用
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页数:7
相关论文
共 18 条
[1]  
[Anonymous], 2017, ARXIV171010501CS
[2]  
Bengio Y., 2009, International Conference on Machine Learning, V382, P41
[3]   Computer-aided Detection of Lung Cancer on Chest Radiographs: Effect on Observer Performance [J].
de Hoop, Bartjan ;
De Boo, Diederik W. ;
Gietema, Hester A. ;
van Hoorn, Frans ;
Mearadji, Banafsche ;
Schijf, Laura ;
van Ginneken, Bram ;
Prokop, Mathias ;
Schaefer-Prokop, Cornelia .
RADIOLOGY, 2010, 257 (02) :532-540
[4]  
Deng J, 2009, PROC CVPR IEEE, P248, DOI 10.1109/CVPRW.2009.5206848
[5]   Deep Residual Learning for Image Recognition [J].
He, Kaiming ;
Zhang, Xiangyu ;
Ren, Shaoqing ;
Sun, Jian .
2016 IEEE CONFERENCE ON COMPUTER VISION AND PATTERN RECOGNITION (CVPR), 2016, :770-778
[6]   Densely Connected Convolutional Networks [J].
Huang, Gao ;
Liu, Zhuang ;
van der Maaten, Laurens ;
Weinberger, Kilian Q. .
30TH IEEE CONFERENCE ON COMPUTER VISION AND PATTERN RECOGNITION (CVPR 2017), 2017, :2261-2269
[7]   Medical-based Deep Curriculum Learning for Improved Fracture Classification [J].
Jimenez-Sanchez, Amelia ;
Mateus, Diana ;
Kirchhoff, Sonja ;
Kirchhoff, Chlodwig ;
Biberthaler, Peter ;
Navab, Nassir ;
Gonzalez Ballester, Miguel A. ;
Piella, Gemma .
MEDICAL IMAGE COMPUTING AND COMPUTER ASSISTED INTERVENTION - MICCAI 2019, PT VI, 2019, 11769 :694-702
[8]   Deep Learning at Chest Radiography: Automated Classification of Pulmonary Tuberculosis by Using Convolutional Neural Networks [J].
Lakhani, Paras ;
Sundaram, Baskaran .
RADIOLOGY, 2017, 284 (02) :574-582
[9]   Lung cancers missed on chest radiographs: Results obtained with a commercial computer-aided detection program [J].
Li, Feng ;
Engelmann, Roger ;
Metz, Charles E. ;
Doi, Kunio ;
MacMahon, Heber .
RADIOLOGY, 2008, 246 (01) :273-280
[10]  
N.I. of Health, 2017, NIH CLIN CTR PROV ON