Screening and Identification of Key Biomarkers in Pancreatic Cancer: Evidence from Bioinformatic Analysis

被引:2
|
作者
Zhang, Meng [1 ]
Di, Chen-Yi [2 ]
Guo, Peng [3 ]
Meng, Ling-Bing [4 ]
Shan, Meng-Jie [5 ]
Qiu, Yong [6 ]
Guo, Pei-Yuan [7 ]
Dong, Ke-Qin [7 ]
Xie, Qi [8 ]
Wang, Qiang [9 ]
机构
[1] Hebei Med Univ, Hosp 4, Hepatol Surg Dept, Shijiazhuang, Hebei, Peoples R China
[2] Peking Univ, Sch Basic Med, Beijing, Peoples R China
[3] Hebei Med Univ, Hosp 4, Dept Orthoped, Shijiazhuang, Hebei, Peoples R China
[4] Beijing Hosp, Natl Ctr Gerontol, Dept Neurol, Beijing, Peoples R China
[5] Chinese Acad Med Sci & Peking Union Med Coll, Beijing, Peoples R China
[6] Beijing Hosp, Natl Ctr Gerontol, Dept Anesthesiol, Beijing, Peoples R China
[7] Hebei Med Univ, Basic Med Inst, Shijiazhuang, Hebei, Peoples R China
[8] Hebei Med Univ, Hosp 4, Dept Nutr, Shijiazhuang, Hebei, Peoples R China
[9] Hebei Med Univ, Hosp 4, Dept Thorac Surg, Shijiazhuang, Hebei, Peoples R China
关键词
bioinformatic analysis; biomarker; pancreatic cancer; GENE ONTOLOGY; EXPRESSION; HALLMARKS; INVASION; PATHWAY; ASPM; TOOL;
D O I
10.1089/cmb.2019.0189
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Pancreatic cancer (PC) whose mortality is comparable to morbidity is a highly fatal disease. Early approaches of diagnosis and treatment for PC are quite limited, so it is of great urgency to figure out the exact tumorigenesis and development mechanism of PC. To identify the related molecular markers of pancreatic oncogenesis, we downloaded three microarray datasets (GSE63111, GSE101448, and GSE107610) from Gene Expression Omnibus (GEO) database. The common differentially expressed genes (DEGs) among them were identified, and the corresponding function enrichment analyses were accomplished. The protein-protein interaction network was conducted by Search Tool for the Retrieval of Interacting Genes (STRING), and the corresponding module analysis was accomplished by Cytoscape. There were 55 DEGs found in total. The molecular function and biological processes (BP) of these DEGs mainly include cytokinesis, mitotic nuclear division, cell division, cell proliferation, microtubule-based movement, and mineral absorption. Among the 55 DEGs, 14 hub genes were further confirmed and it was concluded that they mainly function in mitotic cytokinesis, microtubule-based movement, mitotic chromosome condensation, and mitotic spindle assembly from the BP analysis. The survival analysis showed that all the 14 hub genes, especially nucleolar and spindle associated protein 1 and abnormal spindle microtubule assembly, may involve in the tumorigenesis and development of PC. And they might be used as new biomarkers for auxiliary diagnosis and potential targets for immunotherapy of PC.
引用
收藏
页码:1079 / 1091
页数:13
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