DNTTIP1 is a Prognostic Biomarker Correlated With Immune Infiltrates in Hepatocellular Carcinoma: A Study Based on The Cancer Genome Atlas Data

被引:3
作者
Zhu, Changyu [1 ,2 ]
Tong, Rongsheng [2 ,3 ]
Jiang, Xiaolei [4 ]
Xiao, Hua [2 ,3 ]
Guan, Jianmei [5 ]
Shu, Jianchen [6 ]
机构
[1] Univ Elect Sci & Technol China, Sichuan Acad Med Sci & Sichuan Prov Peoples Hosp, Sch Med, Dept Pharm, Chengdu, Peoples R China
[2] Univ Elect Sci & Technol China, Sch Med, Personalized Drug Therapy Key Lab Sichuan Prov, Chengdu, Peoples R China
[3] Sichuan Acad Med Sci & Sichuan Prov Peoples Hosp, Dept Pharm, Chengdu, Peoples R China
[4] Gansu Prov Hosp TCM, Dept Pharm, Lanzhou, Peoples R China
[5] Sichuan Acad Med Sci & Sichuan Prov Peoples Hosp, Cent Sterile Supply Dept, Chengdu, Peoples R China
[6] Peoples Hosp Leshan, Dept Orthoped, Leshan, Peoples R China
关键词
DNTTIP1; HCC; tumor infiltration; prognosis; immune infiltrating; SURVIVAL; CELLS; P53; RESVERATROL; NEUTROPHILS; EXPRESSION; PLASTICITY; APOPTOSIS; PROTEIN;
D O I
10.3389/fgene.2021.767834
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Deoxynucleotidyltransferase terminal-interacting protein 1 (DNTTIP1) is involved in the deacetylation of p53 in regulating cell cycle and is associated with cancers at the molecular level. In this study, we evaluated the prognostic value in hepatocellular carcinoma (HCC) based on data from The Cancer Genome Atlas (TCGA) database. Kruskal-Wallis test, Wilcoxon signed-rank test, and logistic regression were used to evaluate the relationship between DNTTIP1 expression and clinicopathological features. Cox regression and the Kaplan-Meier method were adopted to evaluate prognosis-related factors. Gene set enrichment analysis (GSEA) was performed to identify the key pathways related to DNTTIP1. The correlations between DNTTIP1 and cancer immune infiltrates were investigated by single-sample Gene Set Enrichment Analysis (ssGSEA). DNTTIP1 was found to be upregulated with amplification in tumor tissues in multiple HCC cohorts. High DNTTIP1 expression was associated with poorer overall survival (OS) and disease-free survival (DFS). GSEA suggested that DNTTIP1 regulates the cell cycle mitotic, G1/S, and G2/M phases and Fc fragment of IgE receptor I (FCERI)-mediated NF-kappa B and MAPK pathway and Fc fragment of IgG receptor (FCGR) activation pathways. Notably, ssGSEA indicated that DNTTIP1 expression was positively correlated with infiltrating levels of Th2 cells, Tfh, NK CD56 bright cells, aDCs, T helper cells, Th1 cells, and macrophages. These findings suggest that DNTTIP1 is correlated with prognosis and immune infiltration in HCC, which lays a foundation for further study of the immune-regulatory role of DNTTIP1 in HCC.
引用
收藏
页数:11
相关论文
共 42 条
  • [1] Chemoproteomics profiling of HDAC inhibitors reveals selective targeting of HDAC complexes
    Bantscheff, Marcus
    Hopf, Carsten
    Savitski, Mikhail M.
    Dittmann, Antje
    Grandi, Paola
    Michon, Anne-Marie
    Schlegl, Judith
    Abraham, Yann
    Becher, Isabelle
    Bergamini, Giovanna
    Boesche, Markus
    Delling, Manja
    Duempelfeld, Birgit
    Eberhard, Dirk
    Huthmacher, Carola
    Mathieson, Toby
    Poeckel, Daniel
    Reader, Valerie
    Strunk, Katja
    Sweetman, Gavain
    Kruse, Ulrich
    Neubauer, Gitte
    Ramsden, Nigel G.
    Drewes, Gerard
    [J]. NATURE BIOTECHNOLOGY, 2011, 29 (03) : 255 - U124
  • [2] Spatiotemporal Dynamics of Intratumoral Immune Cells Reveal the Immune Landscape in Human Cancer
    Bindea, Gabriela
    Mlecnik, Bernhard
    Tosolini, Marie
    Kirilovsky, Amos
    Waldner, Maximilian
    Obenauf, Anna C.
    Angell, Helen
    Fredriksen, Tessa
    Lafontaine, Lucie
    Berger, Anne
    Bruneval, Patrick
    Fridman, Wolf Herman
    Becker, Christoph
    Pages, Franck
    Speicher, Michael R.
    Trajanoski, Zlatko
    Galon, Jerome
    [J]. IMMUNITY, 2013, 39 (04) : 782 - 795
  • [3] SnapShot: TCGA-Analyzed Tumors
    Blum, Amy
    Wang, Peggy
    Zenklusen, Jean C.
    [J]. CELL, 2018, 173 (02) : 530 - 530
  • [4] Cytokeratin 19-fragments (CYFRA 21-1) as a novel serum biomarker for response and survival in patients with advanced pancreatic cancer
    Boeck, S.
    Wittwer, C.
    Heinemann, V.
    Haas, M.
    Kern, C.
    Stieber, P.
    Nagel, D.
    Holdenrieder, S.
    [J]. BRITISH JOURNAL OF CANCER, 2013, 108 (08) : 1684 - 1694
  • [5] Prediction of venous metastases, recurrence, and prognosis in hepatocellular carcinoma based on a unique immune response signature of the liver microenvironment
    Budhu, Anuradha
    Forgues, Marshonna
    Ye, Qing-Hai
    Jia, Hu-Liong
    He, Ping
    Zanetti, Krista A.
    Kammula, Udai S.
    Chen, Yidong
    Qin, Lun-Xiu
    Tang, Zhao-You
    Wang, Xin Wei
    [J]. CANCER CELL, 2006, 10 (02) : 99 - 111
  • [6] Long-Term Survival in Patients with or without Implantable Cardioverter Defibrillator after Transcatheter Aortic Valve Implantation
    Fischer-Rasokat, Ulrich
    Renker, Matthias
    Liebetrau, Christoph
    Weferling, Maren
    Rolf, Andreas
    Hain, Andreas
    Sperzel, Johannes
    Choi, Yeong-Hoon
    Hamm, Christian W.
    Kim, Won-Keun
    [J]. JOURNAL OF CLINICAL MEDICINE, 2021, 10 (13)
  • [7] Hepatocellular carcinoma
    Forner, Alejandro
    Reig, Maria
    Bruix, Jordi
    [J]. LANCET, 2018, 391 (10127) : 1301 - 1314
  • [8] Can we predict protein from mRNA levels?
    Fortelny, Nikolaus
    Overall, Christopher M.
    Pavlidis, Paul
    Freue, Gabriela V. Cohen
    [J]. NATURE, 2017, 547 (7664) : E19 - E22
  • [9] Histone Deacetylase Expressions in Hepatocellular Carcinoma and Functional Effects of Histone Deacetylase Inhibitors on Liver Cancer Cells In Vitro
    Freese, Kim
    Seitz, Tatjana
    Dietrich, Peter
    Lee, Serene M. L.
    Thasler, Wolfgang E.
    Bosserhoff, Anja
    Hellerbrand, Claus
    [J]. CANCERS, 2019, 11 (10)
  • [10] Th17 Cell Plasticity and Functions in Cancer Immunity
    Guery, Leslie
    Hugues, Stephanie
    [J]. BIOMED RESEARCH INTERNATIONAL, 2015, 2015