ape 5.0: an environment for modern phylogenetics and evolutionary analyses in R

被引:3440
作者
Paradis, Emmanuel [1 ]
Schliep, Klaus [2 ]
机构
[1] Univ Montpellier, CNRS, ISEM, EPHE,IRD, F-34095 Montpellier, France
[2] Univ Massachusetts, Dept Biol, Boston, MA 02125 USA
基金
美国国家科学基金会;
关键词
D O I
10.1093/bioinformatics/bty633
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
After more than fifteen years of existence, the R package ape has continuously grown its contents, and has been used by a growing community of users. The release of version 5.0 has marked a leap towards a modern software for evolutionary analyses. Efforts have been put to improve efficiency, flexibility, support for 'big data' (R's long vectors), ease of use and quality check before a new release. These changes will hopefully make ape a useful software for the study of bio-diversity and evolution in a context of increasing data quantity.
引用
收藏
页码:526 / 528
页数:3
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