Unsupervised Domain Adaptation Based Image Synthesis and Feature Alignment for Joint Optic Disc and Cup Segmentation

被引:55
作者
Lei, Haijun [1 ]
Liu, Weixin [1 ]
Xie, Hai [2 ]
Zhao, Benjian [1 ]
Yue, Guanghui [2 ]
Lei, Baiying [2 ]
机构
[1] Shenzhen Univ, Coll Comp Sci & Software Engn, Key Lab Serv Comp & Applicat, Guangdong Prov Key Lab Popular High Performance C, Shenzhen 518060, Peoples R China
[2] Shenzhen Univ, Natl Reg Key Technol Engn Lab Med Ultrasound, Guangdong Key Lab Biomed Measurements & Ultrasoun, Sch Biomed Engn,Hlth Sci Ctr, Shenzhen 518060, Peoples R China
基金
中国国家自然科学基金;
关键词
Image segmentation; Feature extraction; Image synthesis; Training; Optical imaging; Image edge detection; Generators; Optic disc and cup segmentation; unsupervised domain adaptation; image synthesis; adversarial learning; GLAUCOMA; NETWORK;
D O I
10.1109/JBHI.2021.3085770
中图分类号
TP [自动化技术、计算机技术];
学科分类号
0812 ;
摘要
Due to the discrepancy of different devices for fundus image collection, a well-trained neural network is usually unsuitable for another new dataset. To solve this problem, the unsupervised domain adaptation strategy attracts a lot of attentions. In this paper, we propose an unsupervised domain adaptation method based image synthesis and feature alignment (ISFA) method to segment optic disc and cup on fundus images. The GAN-based image synthesis (IS) mechanism along with the boundary information of optic disc and cup is utilized to generate target-like query images, which serves as the intermediate latent space between source domain and target domain images to alleviate the domain shift problem. Specifically, we use content and style feature alignment (CSFA) to ensure the feature consistency among source domain images, target-like query images and target domain images. The adversarial learning is used to extract domain-invariant features for output-level feature alignment (OLFA). To enhance the representation ability of domain-invariant boundary structure information, we introduce the edge attention module (EAM) for low-level feature maps. Eventually, we train our proposed method on the training set of the REFUGE challenge dataset and test it on Drishti-GS and RIM-ONE_r3 datasets. On the Drishti-GS dataset, our method achieves about 3% improvement of Dice on optic cup segmentation over the next best method. We comprehensively discuss the robustness of our method for small dataset domain adaptation. The experimental results also demonstrate the effectiveness of our method. Our code is available at https://github.com/thinkobj/ISFA.
引用
收藏
页码:90 / 102
页数:13
相关论文
共 48 条
[1]  
[Anonymous], 1999, CLIN EYE VISION CARE
[2]   Detecting the Optic Disc Boundary in Digital Fundus Images Using Morphological, Edge Detection, and Feature Extraction Techniques [J].
Aquino, Arturo ;
Emilio Gegundez-Arias, Manuel ;
Marin, Diego .
IEEE TRANSACTIONS ON MEDICAL IMAGING, 2010, 29 (11) :1860-1869
[3]   Unsupervised Pixel-Level Domain Adaptation with Generative Adversarial Networks [J].
Bousmalis, Konstantinos ;
Silberman, Nathan ;
Dohan, David ;
Erhan, Dumitru ;
Krishnan, Dilip .
30TH IEEE CONFERENCE ON COMPUTER VISION AND PATTERN RECOGNITION (CVPR 2017), 2017, :95-104
[4]   Unsupervised Bidirectional Cross-Modality Adaptation via Deeply Synergistic Image and Feature Alignment for Medical Image Segmentation [J].
Chen, Cheng ;
Dou, Qi ;
Chen, Hao ;
Qin, Jing ;
Heng, Pheng Ann .
IEEE TRANSACTIONS ON MEDICAL IMAGING, 2020, 39 (07) :2494-2505
[5]   Semantic-Aware Generative Adversarial Nets for Unsupervised Domain Adaptation in Chest X-Ray Segmentation [J].
Chen, Cheng ;
Dou, Qi ;
Chen, Hao ;
Heng, Pheng-Ann .
MACHINE LEARNING IN MEDICAL IMAGING: 9TH INTERNATIONAL WORKSHOP, MLMI 2018, 2018, 11046 :143-151
[6]   IOSUDA: an unsupervised domain adaptation with input and output space alignment for joint optic disc and cup segmentation [J].
Chen, Chonglin ;
Wang, Gang .
APPLIED INTELLIGENCE, 2021, 51 (06) :3880-3898
[7]   Supervised Edge Attention Network for Accurate Image Instance Segmentation [J].
Chen, Xier ;
Lian, Yanchao ;
Jiao, Licheng ;
Wang, Haoran ;
Gao, YanJie ;
Shi Lingling .
COMPUTER VISION - ECCV 2020, PT XXVII, 2020, 12372 :617-631
[8]   Learning Semantic Segmentation from Synthetic Data: A Geometrically Guided Input-Output Adaptation Approach [J].
Chen, Yuhua ;
Li, Wen ;
Chen, Xiaoran ;
Van Gool, Luc .
2019 IEEE/CVF CONFERENCE ON COMPUTER VISION AND PATTERN RECOGNITION (CVPR 2019), 2019, :1841-1850
[9]   Superpixel Classification Based Optic Disc and Optic Cup Segmentation for Glaucoma Screening [J].
Cheng, Jun ;
Liu, Jiang ;
Xu, Yanwu ;
Yin, Fengshou ;
Wong, Damon Wing Kee ;
Tan, Ngan-Meng ;
Tao, Dacheng ;
Cheng, Ching-Yu ;
Aung, Tin ;
Wong, Tien Yin .
IEEE TRANSACTIONS ON MEDICAL IMAGING, 2013, 32 (06) :1019-1032
[10]  
Dou Q, 2018, PROCEEDINGS OF THE TWENTY-SEVENTH INTERNATIONAL JOINT CONFERENCE ON ARTIFICIAL INTELLIGENCE, P691