Electron transfer dissociation coupled to an Orbitrap analyzer may promise a straightforward and accurate sequencing of disulfide-bridged cyclic peptides: a case study

被引:8
作者
Duan, Xiaotao [1 ,2 ]
Engler, Frank A. [1 ]
Qu, Jun [1 ,2 ]
机构
[1] SUNY Buffalo, Dept Pharmaceut Sci, Amherst, NY 14260 USA
[2] New York State Ctr Excellence Bioinformat & Life, Buffalo, NY 14203 USA
来源
JOURNAL OF MASS SPECTROMETRY | 2010年 / 45卷 / 12期
关键词
CHARGED PROTEIN CATIONS; SIDE-CHAIN LOSSES; CAPTURE DISSOCIATION; MASS-SPECTROMETRY; NONRIBOSOMAL PEPTIDES; GAS-PHASE; ION; FRAGMENTATION; EPTIFIBATIDE;
D O I
10.1002/jms.1857
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
引用
收藏
页码:1477 / 1482
页数:6
相关论文
共 24 条
  • [1] Sequence-Scrambling Fragmentation Pathways of Protonated Peptides
    Bleiholder, Christian
    Osburn, Sandra
    Williams, Todd D.
    Suhai, Sandor
    Van Stipdonk, Michael
    Harrison, Alex G.
    Paizs, Bela
    [J]. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2008, 130 (52) : 17774 - 17789
  • [2] Fragmentation of peptides with intra-chain disulfide bonds in triple quadrupole mass spectrometry and its quantitative application to biological samples
    Chen, Yun
    Qiao, Shanlei
    Wang, Ce
    [J]. INTERNATIONAL JOURNAL OF MASS SPECTROMETRY, 2009, 288 (1-3) : 68 - 74
  • [3] Secondary fragmentation of linear peptides in electron capture dissociation
    Cooper, HJ
    Hudgins, RR
    Håkansson, K
    Marshall, AG
    [J]. INTERNATIONAL JOURNAL OF MASS SPECTROMETRY, 2003, 228 (2-3) : 723 - 728
  • [4] Characterization of amino acid side chain losses in electron capture dissociation
    Cooper, HJ
    Hudgins, RR
    Håkansson, K
    Marshall, AG
    [J]. JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY, 2002, 13 (03) : 241 - 249
  • [5] A Straightforward and Highly Efficient Precipitation/On-Pellet Digestion Procedure Coupled with a Long Gradient Nano-LC Separation and Orbitrap Mass Spectrometry for Label-Free Expression Profiling of the Swine Heart Mitochondrial Proteome
    Duan, Xiaotao
    Young, Rebeccah
    Straubinger, Robert M.
    Page, Brian
    Cao, Jin
    Wang, Hao
    Yu, Haoying
    Canty, John M., Jr.
    Qu, Jun
    [J]. JOURNAL OF PROTEOME RESEARCH, 2009, 8 (06) : 2838 - 2850
  • [6] Unusual β-sheet periodicity in small cyclic peptides
    Gibbs, AC
    Kondejewski, LH
    Gronwald, W
    Nip, AM
    Hodges, RS
    Sykes, BD
    Wishart, DS
    [J]. NATURE STRUCTURAL BIOLOGY, 1998, 5 (04) : 284 - 288
  • [7] Electron capture dissociation initiates a free radical reaction cascade
    Leymarie, N
    Costello, CE
    O'Connor, PB
    [J]. JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 2003, 125 (29) : 8949 - 8958
  • [8] Determination of eptifibatide concentration in human plasma utilizing the liquid chromatography-tandem mass spectrometry method
    Liu, Jia
    Duan, Xiaotao
    Chen, Xiaoyan
    Zhong, Dafang
    [J]. JOURNAL OF CHROMATOGRAPHY B-ANALYTICAL TECHNOLOGIES IN THE BIOMEDICAL AND LIFE SCIENCES, 2009, 877 (5-6): : 527 - 532
  • [9] Interpretation of Tandem Mass Spectra Obtained from Cyclic Nonribosomal Peptides
    Liu, Wei-Ting
    Ng, Julio
    Meluzzi, Dario
    Bandeira, Nuno
    Gutierrez, Marcelino
    Simmons, Thomas L.
    Schultz, Andrew W.
    Linington, Roger G.
    Moore, Bradley S.
    Gerwick, William H.
    Pevzner, Pavel A.
    Dorrestein, Pieter C.
    [J]. ANALYTICAL CHEMISTRY, 2009, 81 (11) : 4200 - 4209
  • [10] Dissociation of disulfide-intact somatostatin ions: the roles of ion type and dissociation method
    Mentinova, Marija
    Han, Hongling
    McLuckey, Scott A.
    [J]. RAPID COMMUNICATIONS IN MASS SPECTROMETRY, 2009, 23 (17) : 2647 - 2655