Complete plastid genome sequence of Erigeron breviscapus (Asteraceae), an endemic traditional Chinese herbal medicine

被引：2
作者：
Meng, Jing [1 ]
Zhang, Linna [1 ]
Dong, Zhiyuan [2 ]
He, Jun [3 ]
机构：
[1] Yunnan Agr Univ, Coll Hort & Landscape, Kunming, Yunnan, Peoples R China
[2] Yunnan Acad Agr Sci, Inst Med Plant, Kunming 650204, Yunnan, Peoples R China
[3] Chinese Acad Sci, Kunming Inst Bot, Kunming 650204, Yunnan, Peoples R China
来源：
MITOCHONDRIAL DNA PART B-RESOURCES | 2019年 / 4卷 / 02期
基金：
中国国家自然科学基金;
关键词：
Erigeron breviscapus; plastid genome; traditional Chinese herb; endemic species;
D O I：
10.1080/23802359.2019.1605854
中图分类号：
Q3 [遗传学];
学科分类号：
071007 ; 090102 ;
摘要：
Erigeron breviscapus is an important traditional Chinese herb endemic to China for cardiovascular and cerebral vessel diseases. Here, the complete plastid genome of E. brevisapus was sequenced using Illumina sequencing technology. The complete chloroplast genome size is 152,183 bp, including a large single-copy region of 84,705 bp, a small single-copy region of 18,112 bp and a pair of inverted repeat regions of 24,683 bp. The total GC content is 37.2%. The genome contains 113 genes, including 80 protein-coding genes, 29 tRNA genes, and four rRNA genes. Phylogenetic analysis showed that E. breviscapus, Aster altaicus, and Eschenbachia blinii formed a clade with 100% bootstrap support.
引用
收藏
页码：4077 / 4078
页数：2
相关论文
共 50 条
[31]   Characterization of the complete plastid genome sequence of the endangered species Bretschneidera sinensis [J].
Fengping Dong ;
Xinhong Liu ;
Yanqin Zhang ;
Ruisen Lu ;
Zhixin Zheng ;
Xin Shen ;
Yingang Li .
Conservation Genetics Resources, 2019, 11 :287-290
[32]   The complete nucleotide molecular sequence of plastid genome ofZanthoxylum armatum(Rutaceae) [J].
Sa, Wei ;
Liang, Jian ;
Shang, Qian-Han ;
Liu, Mi-Li ;
Wang, Ma-Li ;
Li, Zhong-Hu .
MITOCHONDRIAL DNA PART B-RESOURCES, 2020, 5 (03) :3418-3419
[33]   Complete plastid genome sequences of Coreanomecon hylomeconoides Nakai (Papaveraceae), a Korea endemic genus [J].
Kim, Hoe-Won ;
Kim, Ki-Joong .
MITOCHONDRIAL DNA PART B-RESOURCES, 2016, 1 (01) :601-602
[34]   Complete plastid genome sequences of Abeliophyllum distichum Nakai (Oleaceae), a Korea endemic genus [J].
Kim, Hoe-Won ;
Lee, Hae-Lim ;
Lee, Dong-Keun ;
Kim, Ki-Joong .
MITOCHONDRIAL DNA PART B-RESOURCES, 2016, 1 (01) :596-598
[35]   Complete plastid genome sequence of Daucus carota: Implications for biotechnology and phylogeny of angiosperms [J].
Tracey Ruhlman ;
Seung-Bum Lee ;
Robert K Jansen ;
Jessica B Hostetler ;
Luke J Tallon ;
Christopher D Town ;
Henry Daniell .
BMC Genomics, 7
[36]   The complete plastid genome sequence of Viola selkirkii Pursh ex Goldie (Violaceae) [J].
Go, Ah-reum ;
Cheon, Kyeong-Sik ;
Yoo, Ki-Oug .
MITOCHONDRIAL DNA PART B-RESOURCES, 2022, 7 (06) :1196-1198
[37]   Phylogeny and Comparative Analysis of Chinese Chamaesium Species Revealed by the Complete Plastid Genome [J].
Guo, Xian-Lin ;
Zheng, Hong-Yi ;
Price, Megan ;
Zhou, Song-Dong ;
He, Xing-Jin .
PLANTS-BASEL, 2020, 9 (08) :1-14
[38]   The complete chloroplast genome sequence of Fargesia qinlingensis (Poaceae): an endemic to China [J].
Zhou, Ya Fu ;
Wang, Yu Chao ;
Ni, Xi Lu ;
Mao, Shao Li .
MITOCHONDRIAL DNA PART B-RESOURCES, 2018, 3 (02) :613-614
[39]   The complete chloroplast genome sequence of Codonopsis minima (Campanulaceae), an endemic to Korea [J].
Kyeong-Sik Cheon ;
Kyung-Ah Kim ;
Jun-Soo Han ;
Ki-Oug Yoo .
Conservation Genetics Resources, 2017, 9 :541-543
[40]   The complete chloroplast genome sequence of Codonopsis minima (Campanulaceae), an endemic to Korea [J].
Cheon, Kyeong-Sik ;
Kim, Kyung-Ah ;
Han, Jun-Soo ;
Yoo, Ki-Oug .
CONSERVATION GENETICS RESOURCES, 2017, 9 (04) :541-543
12345