Forest tree genomics: growing resources and applications

被引:520
作者
Neale, David B. [1 ]
Kremer, Antoine [2 ]
机构
[1] Univ Calif Davis, Dept Plant Sci, Davis, CA 95616 USA
[2] Univ Bordeaux 1, INRA, UMR Biodiversite Genes & Communautes, F-33612 Cestas, France
关键词
QUANTITATIVE TRAIT LOCI; PINE PINUS-TAEDA; COASTAL DOUGLAS-FIR; WOOD PROPERTY TRAITS; CONTROLLING ADAPTIVE TRAITS; SINGLE NUCLEOTIDE POLYMORPHISMS; GENE-EXPRESSION PATTERNS; ASPEN POPULUS-TREMULA; QUERCUS-ROBUR L; LOBLOLLY-PINE;
D O I
10.1038/nrg2931
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Over the past two decades, research in forest tree genomics has lagged behind that of model and agricultural systems. However, genomic research in forest trees is poised to enter into an important and productive phase owing to the advent of next-generation sequencing technologies, the enormous genetic diversity in forest trees and the need to mitigate the effects of climate change. Research on long-lived woody perennials is extending our molecular knowledge of complex life histories and adaptations to the environment enriching a field that has traditionally drawn biological inference from a few short-lived herbaceous species.
引用
收藏
页码:111 / 122
页数:12
相关论文
共 185 条
[51]   Microarray gene expression profiling of developmental transitions in Sitka spruce (Picea sitchensis) apical shoots [J].
Friedmann, Michael ;
Ralph, Steven G. ;
Aeschliman, Dana ;
Zhuang, Jun ;
Ritland, Kermit ;
Ellis, Brian E. ;
Bohlmann, Joerg ;
Douglas, Carl J. .
JOURNAL OF EXPERIMENTAL BOTANY, 2007, 58 (03) :593-614
[52]   Priming defense genes and metabolites in hybrid poplar by the green leaf volatile cis-3-hexenyl acetate [J].
Frost, Christopher J. ;
Mescher, Mark C. ;
Dervinis, Christopher ;
Davis, John M. ;
Carlson, John E. ;
De Moraes, Consuelo M. .
NEW PHYTOLOGIST, 2008, 180 (03) :722-733
[53]   Results on quantitative trait loci for flushing date in oaks can be transferred to different segregating progenies [J].
Gailing, O ;
Kremer, A ;
Steiner, W ;
Hattemer, HH ;
Finkeldey, R .
PLANT BIOLOGY, 2005, 7 (05) :516-525
[54]   An excess of nonsynonymous polymorphism and extensive haplotype structure at the PtABI1B locus in European aspen (Populus tremula):: a case of balancing selection in an obligately outcrossing plant? [J].
Garcia, M. V. ;
Ingvarsson, P. K. .
HEREDITY, 2007, 99 (04) :381-388
[55]   Use of Ecotilling as an efficient SNP discovery tool to survey genetic variation in wild populations of Populus trichocarpa [J].
Gilchrist, EJ ;
Haughn, GW ;
Ying, CC ;
Otto, SP ;
Zhuang, J ;
Cheung, D ;
Hamberger, B ;
Aboutorabi, F ;
Kalynyak, T ;
Johnson, L ;
Bohlmann, J ;
Ellis, BE ;
Douglas, CJ ;
Cronk, QCB .
MOLECULAR ECOLOGY, 2006, 15 (05) :1367-1378
[56]   Association genetics in Pinus taeda L.: II.: Carbon isotope discrimination [J].
Gonzalez-Martinez, S. C. ;
Huber, D. ;
Ersoz, E. ;
Davis, J. M. ;
Neale, D. B. .
HEREDITY, 2008, 101 (01) :19-26
[57]   Association genetics in Pinus taeda L. I.: Wood property traits [J].
Gonzalez-Martinez, Santiago C. ;
Wheeler, Nicholas C. ;
Ersoz, Elhan ;
Nelson, C. Dana ;
Neale, David B. .
GENETICS, 2007, 175 (01) :399-409
[58]   Megagametophyte-derived linkage maps of white spruce (Picea glauca) based on RAPD, SCAR and ESTP markers [J].
Gosselin, I ;
Zhou, Y ;
Bousquet, J ;
Isabel, N .
THEORETICAL AND APPLIED GENETICS, 2002, 104 (6-7) :987-997
[59]   Microgenomic analysis reveals cell type-specific gene expression patterns between ray and fusiform initials within the cambial meristem of Populus [J].
Goue, Nadia ;
Lesage-Descauses, Marie-Claude ;
Mellerowicz, Ewa J. ;
Magel, Elisabeth ;
Label, Philippe ;
Sundberg, Bjoern .
NEW PHYTOLOGIST, 2008, 180 (01) :45-56
[60]  
GRATTAPAGLIA D, 1994, GENETICS, V137, P1121