Construction of a prognosis-predicting model based on autophagy-related genes for hepatocellular carcinoma (HCC) patients

被引:12
作者
Zhu, Yayun [1 ]
Wang, Ru [2 ,3 ]
Chen, Wanbin [4 ]
Chen, Qiuyu [5 ]
Zhou, Jian [6 ,7 ,8 ,9 ,10 ]
机构
[1] Fudan Univ, Zhongshan Hosp, Liver Canc Inst, Dept Liver Surg & Transplantat, Shanghai, Peoples R China
[2] Johns Hopkins Univ, Inst Cell Engn, Sch Med, Baltimore, MD 21205 USA
[3] Xi An Jiao Tong Univ, Affiliated Hosp 1, Dept Breast Surg, Xian, Shaanxi, Peoples R China
[4] Johns Hopkins Univ, Dept Mkt, Carey Business Sch, Baltimore, MD 21202 USA
[5] Fudan Univ, Dept Clin Immunol, Childrens Hosp, Shanghai, Peoples R China
[6] Fudan Univ, Liver Canc Inst, Dept Liver Surg & Transplantat, Shanghai, Peoples R China
[7] Fudan Univ, State Key Lab Genet Engn, Shanghai, Peoples R China
[8] Fudan Univ, Key Lab Carcinogenesis & Canc Invas, Minist Educ, Shanghai, Peoples R China
[9] Fudan Univ, Inst Biomed Sci, Shanghai, Peoples R China
[10] Fudan Univ, Zhongshan Hosp, Shanghai Key Lab Organ Transplantat, Shanghai, Peoples R China
来源
AGING-US | 2020年 / 12卷 / 14期
基金
中国国家自然科学基金; 国家重点研发计划;
关键词
autophagy-related genes; prognosis; hepatocellular carcinoma; The Cancer Genome Atlas; TARGETING AUTOPHAGY; INDUCED APOPTOSIS; POOR-PROGNOSIS; CANCER; INHIBITION; RHEB; PROLIFERATION; TUMORIGENESIS; ACTIVATION; THERAPY;
D O I
10.18632/aging.103507
中图分类号
Q2 [细胞生物学];
学科分类号
071009 ; 090102 ;
摘要
Background: Autophagy, a highly conserved cellular catabolic process by which the eukaryotic cells deliver autophagosomes engulfing cellular proteins and organelles to lysosomes for degradation, is critical for maintaining cellular homeostasis in response to various signals and nutrient stresses. The dysregulation of autophagy has been noted in the pathogenesis of cancers. Our study aims to investigate the prognosis-predicting value of autophagy-related genes (ARG) in hepatocellular carcinoma (HCC). Results: The signature was constructed based on eight ARGs, which stratified HCC patients into high- and low-risk groups in terms of overall survival (OS) (Hazard Ratio, HR=4.641, 95% Confidential Interval, CI, 3.365-5.917, P=0.000). The ARG signature is an independent prognostic indicator for HCC patients (HR = 1.286, 95% CI, 1.194-1.385; P < 0.001). The area under the receiver operating characteristic (ROC) curve (AUC) for 5-year survival is 0.765. Conclusion: This study provides a potential prognostic signature for predicting the prognosis of HCC patients and molecular insights into the significance of autophagy in HCC. Methods: Sixty-two differentially expressed ARGs and the clinical characteristics and basic information of the 369 enrolled HCC patients were retrieved from The Cancer Genome Atlas (TCGA) database. the Cox proportional hazard regression analysis was adopted to identify survival-related ARGs, based on which a prognosis predicting signature was constructed.
引用
收藏
页码:14582 / 14592
页数:11
相关论文
共 41 条
  • [1] Recent insights into the function of autophagy in cancer
    Amaravadi, Ravi
    Kimmelman, Alec C.
    White, Eileen
    [J]. GENES & DEVELOPMENT, 2016, 30 (17) : 1913 - 1930
  • [2] Mouse Models Address Key Concerns Regarding Autophagy Inhibition in Cancer Therapy
    Amaravadi, Ravi
    Debnath, Jayanta
    [J]. CANCER DISCOVERY, 2014, 4 (08) : 873 - 875
  • [3] Autophagy inhibition enhances therapy-induced apoptosis in a Myc-induced model of lymphoma
    Amaravadi, Ravi K.
    Yu, Duonan
    Lum, Julian J.
    Bui, Thi
    Christophorou, Maria A.
    Evan, Gerard I.
    Thomas-Tikhonenko, Andrei
    Thompson, Craig B.
    [J]. JOURNAL OF CLINICAL INVESTIGATION, 2007, 117 (02) : 326 - 336
  • [4] Principles and Current Strategies for Targeting Autophagy for Cancer Treatment
    Amaravadi, Ravi K.
    Lippincott-Schwartz, Jennifer
    Yin, Xiao-Ming
    Weiss, William A.
    Takebe, Naoko
    Timmer, William
    DiPaola, Robert S.
    Lotze, Michael T.
    White, Eileen
    [J]. CLINICAL CANCER RESEARCH, 2011, 17 (04) : 654 - 666
  • [5] Hsp70-and Hsp90-Mediated Regulation of the Conformation of p53 DNA Binding Domain and p53 Cancer Variants
    Boysen, Marta
    Kityk, Roman
    Mayer, Matthias P.
    [J]. MOLECULAR CELL, 2019, 74 (04) : 831 - +
  • [6] Rheb Promotes Cancer Cell Survival Through p27Kip1-Dependent Activation of Autophagy
    Campos, Tania
    Ziehe, Javiera
    Palma, Mario
    Escobar, David
    Tapia, Julio C.
    Pincheira, Roxana
    Castro, Ariel F.
    [J]. MOLECULAR CARCINOGENESIS, 2016, 55 (02) : 220 - 229
  • [7] CBAP modulates Akt-dependent TSC2 phosphorylation to promote Rheb-mTORC1 signaling and growth of T-cell acute lymphoblastic leukemia
    Chiang, Yun-Jung
    Liao, Wei-Ting
    Ho, Kun-Chin
    Wang, Shih-Hao
    Chen, Yu-Guang
    Ho, Ching-Liang
    Huang, Shiu-Feng
    Shih, Lee-Yung
    Yang-Yen, Hsin-Fang
    Yen, Jeffrey Jong-Young
    [J]. ONCOGENE, 2019, 38 (09) : 1432 - 1447
  • [8] IMPDH2 promotes colorectal cancer progression through activation of the PI3K/AKT/mTOR and PI3K/AKT/FOXO1 signaling pathways
    Duan, Shiyu
    Huang, Wenqing
    Liu, Xiaoting
    Liu, Xuming
    Chen, Nana
    Xu, Qiong
    Hu, Yukun
    Song, Wen
    Zhou, Jun
    [J]. JOURNAL OF EXPERIMENTAL & CLINICAL CANCER RESEARCH, 2018, 37
  • [9] Autophagy in malignant transformation and cancer progression
    Galluzzi, Lorenzo
    Pietrocola, Federico
    Bravo-San Pedro, Jose Manuel
    Amaravadi, Ravi K.
    Baehrecke, Eric H.
    Cecconi, Francesco
    Codogno, Patrice
    Debnath, Jayanta
    Gewirtz, David A.
    Karantza, Vassiliki
    Kimmelman, Alec
    Kumar, Sharad
    Levine, Beth
    Maiuri, Maria Chiara
    Martin, Seamus J.
    Penninger, Josef
    Piacentini, Mauro
    Rubinsztein, David C.
    Simon, Hans-Uwe
    Simonsen, Anne
    Thorburn, Andrew M.
    Velasco, Guillermo
    Ryan, Kevin M.
    Kroemer, Guido
    [J]. EMBO JOURNAL, 2015, 34 (07) : 856 - 880
  • [10] Multiple carcinogenesis contributes to the heterogeneity of HCC
    Gao, Qiang
    Wang, Xiao-Ying
    Zhou, Jian
    Fan, Jia
    [J]. NATURE REVIEWS GASTROENTEROLOGY & HEPATOLOGY, 2015, 12 (01) : 13 - 13