The Human NUP58 Nucleoporin Can Form Amyloids In Vitro and In Vivo

被引:6
作者
Danilov, Lavrentii G. [1 ]
Moskalenko, Svetlana E. [1 ,2 ]
Matveenko, Andrew G. [1 ]
Sukhanova, Xenia, V [1 ]
Belousov, Mikhail, V [1 ,3 ]
Zhouravleva, Galina A. [1 ,4 ]
Bondarev, Stanislav A. [1 ,4 ]
机构
[1] St Petersburg State Univ, Dept Genet & Biotechnol, St Petersburg 199034, Russia
[2] Russian Acad Sci, Vavilov Inst Gen Genet, St Petersburg Branch, St Petersburg 199034, Russia
[3] All Russia Res Inst Agr Microbiol, Lab Prote Supraorganismal Syst, St Petersburg 196608, Russia
[4] St Petersburg State Univ, Lab Amyloid Biol, St Petersburg 199034, Russia
基金
俄罗斯科学基金会;
关键词
protein aggregation; human amyloids; Congo Red; evolution; nucleoporins; C-DAG; ArchCandy; NUCLEAR-PORES; PRION; AGGREGATION; PLASTICITY; PREDICTION; PROTEINS; BARRIER;
D O I
10.3390/biomedicines9101451
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Amyloids are fibrillar protein aggregates with a cross-beta structure and unusual features, including high resistance to detergent or protease treatment. More than two hundred different proteins with amyloid or amyloid-like properties are already known. Several examples of nucleoporins (e.g., yeast Nup49, Nup100, Nup116, and human NUP153) are supposed to form amyloid fibrils. In this study, we demonstrated an ability of the human NUP58 nucleoporin to form amyloid aggregates in vivo and in vitro. Moreover, we found two forms of NUP58 aggregates: oligomers and polymers stabilized by disulfide bonds. Bioinformatic analysis revealed that all known orthologs of this protein are potential amyloids which possess several regions with conserved ability to aggregation. The biological role of nucleoporin amyloid formation is debatable. We suggest that it is a rather abnormal process, which is characteristic for many proteins implicated in phase separation.
引用
收藏
页数:12
相关论文
共 42 条
[1]   Amyloid-like interactions within nucleoporin FG hydrogels [J].
Ader, Christian ;
Frey, Steffen ;
Maas, Werner ;
Schmidt, Hermann Broder ;
Goerlich, Dirk ;
Baldus, Marc .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2010, 107 (14) :6281-6285
[2]   A structure-based approach to predict predisposition to amyloidosis [J].
Ahmed, Abdullah B. ;
Znassi, Nadia ;
Chateau, Marie-Therese ;
Kajava, Andrey V. .
ALZHEIMERS & DEMENTIA, 2015, 11 (06) :681-690
[3]   A Systematic Survey Identifies Prions and Illuminates Sequence Features of Prionogenic Proteins [J].
Alberti, Simon ;
Halfmann, Randal ;
King, Oliver ;
Kapila, Atul ;
Lindquist, Susan .
CELL, 2009, 137 (01) :146-158
[4]   Amyloid nomenclature 2020: update and recommendations by the International Society of Amyloidosis (ISA) nomenclature committee [J].
Benson, Merrill D. ;
Buxbaum, Joel N. ;
Eisenberg, David S. ;
Merlini, Giampaolo ;
Saraiva, Maria J. M. ;
Sekijima, Yoshiki ;
Sipe, Jean D. ;
Westermark, Per .
AMYLOID-JOURNAL OF PROTEIN FOLDING DISORDERS, 2020, 27 (04) :217-222
[5]   Structure-based view on [PSI+] prion properties [J].
Bondarev, Stanislav A. ;
Zhouravleva, Galina A. ;
Belousov, Mikhail V. ;
Kajava, Andrey V. .
PRION, 2015, 9 (03) :190-199
[6]   The liquid state of FG-nucleoporins mimics permeability barrier properties of nuclear pore complexes [J].
Celetti, Giorgia ;
Paci, Giulia ;
Caria, Joana ;
VanDelinder, Virginia ;
Bachand, George ;
Lemke, Edward A. .
JOURNAL OF CELL BIOLOGY, 2020, 219 (01)
[7]   Amyloid formation by globular proteins under native conditions [J].
Chiti, Fabrizio ;
Dobson, Christopher M. .
NATURE CHEMICAL BIOLOGY, 2009, 5 (01) :15-22
[8]   The Nup62 Coiled-Coil Motif Provides Plasticity for Triple-Helix Bundle Formation [J].
Dewangan, Pravin S. ;
Sonawane, Parshuram J. ;
Chouksey, Ankita R. ;
Chauhan, Radha .
BIOCHEMISTRY, 2017, 56 (22) :2803-2811
[9]   IUPred:: web server for the prediction of intrinsically unstructured regions of proteins based on estimated energy content [J].
Dosztányi, Z ;
Csizmok, V ;
Tompa, P ;
Simon, I .
BIOINFORMATICS, 2005, 21 (16) :3433-3434
[10]   The pairwise energy content estimated from amino acid composition discriminates between folded and intrinsically unstructured proteins [J].
Dosztányi, Z ;
Csizmók, V ;
Tompa, P ;
Simon, I .
JOURNAL OF MOLECULAR BIOLOGY, 2005, 347 (04) :827-839