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The conundrum in enzymatic reactions related to biosynthesis of D-amino acids in bacteria
被引:4
作者:

Pollegioni, Loredano
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Univ Insubria, Dipartimento Biotecnol & Sci Vita, Prot Factory 2 0, Varese, Italy Univ Insubria, Dipartimento Biotecnol & Sci Vita, Prot Factory 2 0, Varese, Italy

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[1] Univ Insubria, Dipartimento Biotecnol & Sci Vita, Prot Factory 2 0, Varese, Italy
关键词:
D-glutamate;
enzyme promiscuity;
peptidoglycan;
PLP-containing enzymes;
CELL-WALL;
ELUCIDATION;
D O I:
10.1111/febs.16475
中图分类号:
Q5 [生物化学];
Q7 [分子生物学];
学科分类号:
071010 ;
081704 ;
摘要:
D-Amino acids (D-AAs) are key components of the peptidoglycan matrix in bacterial cells. Various bacterial species are known to produce D-AAs by using different enzymes, such as highly specific and broad-spectrum racemases. Miyamoto et al. studied the biosynthesis of D-glutamate in the hyperthermophile and anaerobic Gram-negative bacterium, Thermotoga maritima, which does not possess a broad-spectrum racemase. The investigated TM0831 enzyme catalyzes both a D-amino acid aminotransferase reaction producing D-glutamate and an amino acid racemase activity aimed at generating D-aspartate and D-glutamate from the corresponding L-enantiomers. TM0831 represents an example of natural molecular evolution process favoring the enzyme versatility.
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页码:5895 / 5898
页数:4
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共 16 条
[1]
New Insights Into the Mechanisms and Biological Roles of D-Amino Acids in Complex Eco-Systems
[J].
Aliashkevich, Alena
;
Alvarez, Laura
;
Cava, Felipe
.
FRONTIERS IN MICROBIOLOGY,
2018, 9

Aliashkevich, Alena
论文数: 0 引用数: 0
h-index: 0
机构:
Umea Univ, Dept Mol Biol, Lab Mol Infect Med Sweden MIMS, Umea, Sweden Umea Univ, Dept Mol Biol, Lab Mol Infect Med Sweden MIMS, Umea, Sweden

Alvarez, Laura
论文数: 0 引用数: 0
h-index: 0
机构:
Umea Univ, Dept Mol Biol, Lab Mol Infect Med Sweden MIMS, Umea, Sweden Umea Univ, Dept Mol Biol, Lab Mol Infect Med Sweden MIMS, Umea, Sweden

Cava, Felipe
论文数: 0 引用数: 0
h-index: 0
机构:
Umea Univ, Dept Mol Biol, Lab Mol Infect Med Sweden MIMS, Umea, Sweden Umea Univ, Dept Mol Biol, Lab Mol Infect Med Sweden MIMS, Umea, Sweden
[2]
The Elucidation of the Structure of Thermotoga maritima Peptidoglycan Reveals Two Novel Types of Cross-link
[J].
Boniface, Audrey
;
Parquet, Claudine
;
Arthur, Michel
;
Mengin-Lecreulx, Dominique
;
Blanot, Didier
.
JOURNAL OF BIOLOGICAL CHEMISTRY,
2009, 284 (33)
:21856-21862

Boniface, Audrey
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Paris 11, CNRS, Lab Enveloppes Bacteriennes & Antibiot, Inst Biochim & Biophys Mol & Cellulaire,UMR 8619, F-91405 Orsay, France Univ Paris 11, CNRS, Lab Enveloppes Bacteriennes & Antibiot, Inst Biochim & Biophys Mol & Cellulaire,UMR 8619, F-91405 Orsay, France

Parquet, Claudine
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Paris 11, CNRS, Lab Enveloppes Bacteriennes & Antibiot, Inst Biochim & Biophys Mol & Cellulaire,UMR 8619, F-91405 Orsay, France Univ Paris 11, CNRS, Lab Enveloppes Bacteriennes & Antibiot, Inst Biochim & Biophys Mol & Cellulaire,UMR 8619, F-91405 Orsay, France

Arthur, Michel
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Paris 06, Lab Rech Mol Antibiot, Ctr Rech Cordeliers, UMR S 872, F-75006 Paris, France
Univ Paris 05, UMR S 872, F-75006 Paris, France
INSERM, U872, F-75006 Paris, France Univ Paris 11, CNRS, Lab Enveloppes Bacteriennes & Antibiot, Inst Biochim & Biophys Mol & Cellulaire,UMR 8619, F-91405 Orsay, France

Mengin-Lecreulx, Dominique
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Paris 11, CNRS, Lab Enveloppes Bacteriennes & Antibiot, Inst Biochim & Biophys Mol & Cellulaire,UMR 8619, F-91405 Orsay, France Univ Paris 11, CNRS, Lab Enveloppes Bacteriennes & Antibiot, Inst Biochim & Biophys Mol & Cellulaire,UMR 8619, F-91405 Orsay, France

Blanot, Didier
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Paris 11, CNRS, Lab Enveloppes Bacteriennes & Antibiot, Inst Biochim & Biophys Mol & Cellulaire,UMR 8619, F-91405 Orsay, France Univ Paris 11, CNRS, Lab Enveloppes Bacteriennes & Antibiot, Inst Biochim & Biophys Mol & Cellulaire,UMR 8619, F-91405 Orsay, France
[3]
Disturbance of the bacterial cell wall specifically interferes with biofilm formation
[J].
Bucher, Tabitha
;
Oppenheimer-Shaanan, Yaara
;
Savidor, Alon
;
Bloom-Ackermann, Zohar
;
Kolodkin-Gal, Ilana
.
ENVIRONMENTAL MICROBIOLOGY REPORTS,
2015, 7 (06)
:990-1004

Bucher, Tabitha
论文数: 0 引用数: 0
h-index: 0
机构:
Weizmann Inst Sci, Nancy & Stephen Grand Israel Natl Ctr Personalise, Dept Mol Genet, IL-76100 Rehovot, Israel Weizmann Inst Sci, Nancy & Stephen Grand Israel Natl Ctr Personalise, Dept Mol Genet, IL-76100 Rehovot, Israel

Oppenheimer-Shaanan, Yaara
论文数: 0 引用数: 0
h-index: 0
机构:
Weizmann Inst Sci, Nancy & Stephen Grand Israel Natl Ctr Personalise, Dept Mol Genet, IL-76100 Rehovot, Israel Weizmann Inst Sci, Nancy & Stephen Grand Israel Natl Ctr Personalise, Dept Mol Genet, IL-76100 Rehovot, Israel

Savidor, Alon
论文数: 0 引用数: 0
h-index: 0
机构:
Weizmann Inst Sci, Nancy & Stephen Grand Israel Natl Ctr Personalise, Botton Inst Prot Profiling, IL-76100 Rehovot, Israel Weizmann Inst Sci, Nancy & Stephen Grand Israel Natl Ctr Personalise, Dept Mol Genet, IL-76100 Rehovot, Israel

Bloom-Ackermann, Zohar
论文数: 0 引用数: 0
h-index: 0
机构:
Weizmann Inst Sci, Nancy & Stephen Grand Israel Natl Ctr Personalise, Dept Mol Genet, IL-76100 Rehovot, Israel Weizmann Inst Sci, Nancy & Stephen Grand Israel Natl Ctr Personalise, Dept Mol Genet, IL-76100 Rehovot, Israel

论文数: 引用数:
h-index:
机构:
[4]
Distinct pathways for modification of the bacterial cell wall by non-canonical D-amino acids
[J].
Cava, Felipe
;
de Pedro, Miguel A.
;
Lam, Hubert
;
Davis, Brigid M.
;
Waldor, Matthew K.
.
EMBO JOURNAL,
2011, 30 (16)
:3442-3453

Cava, Felipe
论文数: 0 引用数: 0
h-index: 0
机构:
Harvard Univ, Sch Med, Brigham & Womens Hosp, Dept Microbiol & Mol Genet,Channing Lab, Boston, MA 02115 USA
HHMI, Boston, MA USA
Univ Autonoma Madrid, Ctr Biol Mol Severo Ochoa, CSIC, Madrid, Spain Harvard Univ, Sch Med, Brigham & Womens Hosp, Dept Microbiol & Mol Genet,Channing Lab, Boston, MA 02115 USA

de Pedro, Miguel A.
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Autonoma Madrid, Ctr Biol Mol Severo Ochoa, CSIC, Madrid, Spain Harvard Univ, Sch Med, Brigham & Womens Hosp, Dept Microbiol & Mol Genet,Channing Lab, Boston, MA 02115 USA

Lam, Hubert
论文数: 0 引用数: 0
h-index: 0
机构:
Harvard Univ, Sch Med, Brigham & Womens Hosp, Dept Microbiol & Mol Genet,Channing Lab, Boston, MA 02115 USA
HHMI, Boston, MA USA Harvard Univ, Sch Med, Brigham & Womens Hosp, Dept Microbiol & Mol Genet,Channing Lab, Boston, MA 02115 USA

Davis, Brigid M.
论文数: 0 引用数: 0
h-index: 0
机构:
Harvard Univ, Sch Med, Brigham & Womens Hosp, Dept Microbiol & Mol Genet,Channing Lab, Boston, MA 02115 USA
HHMI, Boston, MA USA Harvard Univ, Sch Med, Brigham & Womens Hosp, Dept Microbiol & Mol Genet,Channing Lab, Boston, MA 02115 USA

Waldor, Matthew K.
论文数: 0 引用数: 0
h-index: 0
机构:
Harvard Univ, Sch Med, Brigham & Womens Hosp, Dept Microbiol & Mol Genet,Channing Lab, Boston, MA 02115 USA
HHMI, Boston, MA USA Harvard Univ, Sch Med, Brigham & Womens Hosp, Dept Microbiol & Mol Genet,Channing Lab, Boston, MA 02115 USA
[5]
Environmental roles of microbial amino acid racemases
[J].
Hernandez, Sara B.
;
Cava, Felipe
.
ENVIRONMENTAL MICROBIOLOGY,
2016, 18 (06)
:1673-1685

Hernandez, Sara B.
论文数: 0 引用数: 0
h-index: 0
机构:
Umea Univ, Lab Mol Infect Med Sweden, Dept Mol Biol, Umea Ctr Microbial Res, S-90187 Umea, Sweden Umea Univ, Lab Mol Infect Med Sweden, Dept Mol Biol, Umea Ctr Microbial Res, S-90187 Umea, Sweden

Cava, Felipe
论文数: 0 引用数: 0
h-index: 0
机构:
Umea Univ, Lab Mol Infect Med Sweden, Dept Mol Biol, Umea Ctr Microbial Res, S-90187 Umea, Sweden Umea Univ, Lab Mol Infect Med Sweden, Dept Mol Biol, Umea Ctr Microbial Res, S-90187 Umea, Sweden
[6]
Enzyme promiscuity: evolutionary and mechanistic aspects
[J].
Khersonsky, Olga
;
Roodveldt, Cintia
;
Tawfik, Dan S.
.
CURRENT OPINION IN CHEMICAL BIOLOGY,
2006, 10 (05)
:498-508

论文数: 引用数:
h-index:
机构:

论文数: 引用数:
h-index:
机构:

Tawfik, Dan S.
论文数: 0 引用数: 0
h-index: 0
机构:
Weizmann Inst Sci, Dept Biol Sci, IL-76100 Rehovot, Israel Weizmann Inst Sci, Dept Biol Sci, IL-76100 Rehovot, Israel
[7]
D-Amino Acids Govern Stationary Phase Cell Wall Remodeling in Bacteria
[J].
Lam, Hubert
;
Oh, Dong-Chan
;
Cava, Felipe
;
Takacs, Constantin N.
;
Clardy, Jon
;
de Pedro, Miguel A.
;
Waldor, Matthew K.
.
SCIENCE,
2009, 325 (5947)
:1552-1555

Lam, Hubert
论文数: 0 引用数: 0
h-index: 0
机构:
Harvard Univ, Brigham & Womens Hosp, Channing Lab, Sch Med, Boston, MA 02115 USA
Howard Hughes Med Inst, Boston, MA 02115 USA Harvard Univ, Brigham & Womens Hosp, Channing Lab, Sch Med, Boston, MA 02115 USA

Oh, Dong-Chan
论文数: 0 引用数: 0
h-index: 0
机构:
Harvard Univ, Dept Biol Chem & Mol Pharmacol, Sch Med, Boston, MA 02115 USA Harvard Univ, Brigham & Womens Hosp, Channing Lab, Sch Med, Boston, MA 02115 USA

Cava, Felipe
论文数: 0 引用数: 0
h-index: 0
机构:
Harvard Univ, Brigham & Womens Hosp, Channing Lab, Sch Med, Boston, MA 02115 USA
Howard Hughes Med Inst, Boston, MA 02115 USA Harvard Univ, Brigham & Womens Hosp, Channing Lab, Sch Med, Boston, MA 02115 USA

Takacs, Constantin N.
论文数: 0 引用数: 0
h-index: 0
机构:
Harvard Univ, Brigham & Womens Hosp, Channing Lab, Sch Med, Boston, MA 02115 USA
Howard Hughes Med Inst, Boston, MA 02115 USA Harvard Univ, Brigham & Womens Hosp, Channing Lab, Sch Med, Boston, MA 02115 USA

Clardy, Jon
论文数: 0 引用数: 0
h-index: 0
机构:
Harvard Univ, Dept Biol Chem & Mol Pharmacol, Sch Med, Boston, MA 02115 USA Harvard Univ, Brigham & Womens Hosp, Channing Lab, Sch Med, Boston, MA 02115 USA

de Pedro, Miguel A.
论文数: 0 引用数: 0
h-index: 0
机构:
Cient Univ Autonoma Madrid, Ctr Biol Mol Severo Ochoa Consejo Super Invest, Fac Ciencias, Madrid 28049, Spain Harvard Univ, Brigham & Womens Hosp, Channing Lab, Sch Med, Boston, MA 02115 USA

Waldor, Matthew K.
论文数: 0 引用数: 0
h-index: 0
机构:
Harvard Univ, Brigham & Womens Hosp, Channing Lab, Sch Med, Boston, MA 02115 USA
Howard Hughes Med Inst, Boston, MA 02115 USA Harvard Univ, Brigham & Womens Hosp, Channing Lab, Sch Med, Boston, MA 02115 USA
[8]
Functional and structural characterization of thermostable D-amino acid aminotransferases from Geobacillus spp.
[J].
Lee, SG
;
Hong, SP
;
Song, JJ
;
Kim, SJ
;
Kwak, MS
;
Sung, MH
.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY,
2006, 72 (02)
:1588-1594

Lee, SG
论文数: 0 引用数: 0
h-index: 0
机构: Kookmin Univ, Dept Bio & Nanochem, Seoul 136702, South Korea

Hong, SP
论文数: 0 引用数: 0
h-index: 0
机构: Kookmin Univ, Dept Bio & Nanochem, Seoul 136702, South Korea

Song, JJ
论文数: 0 引用数: 0
h-index: 0
机构: Kookmin Univ, Dept Bio & Nanochem, Seoul 136702, South Korea

Kim, SJ
论文数: 0 引用数: 0
h-index: 0
机构: Kookmin Univ, Dept Bio & Nanochem, Seoul 136702, South Korea

Kwak, MS
论文数: 0 引用数: 0
h-index: 0
机构: Kookmin Univ, Dept Bio & Nanochem, Seoul 136702, South Korea

Sung, MH
论文数: 0 引用数: 0
h-index: 0
机构: Kookmin Univ, Dept Bio & Nanochem, Seoul 136702, South Korea
[9]
D-amino acids in foods
[J].
Marcone, Giorgia Letizia
;
Rosini, Elena
;
Crespi, Elena
;
Pollegioni, Loredano
.
APPLIED MICROBIOLOGY AND BIOTECHNOLOGY,
2020, 104 (02)
:555-574

Marcone, Giorgia Letizia
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Insubria, Dept Biotechnol & Life Sci, Via JH Dunant 3, I-21100 Varese, Italy Univ Insubria, Dept Biotechnol & Life Sci, Via JH Dunant 3, I-21100 Varese, Italy

Rosini, Elena
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Insubria, Dept Biotechnol & Life Sci, Via JH Dunant 3, I-21100 Varese, Italy Univ Insubria, Dept Biotechnol & Life Sci, Via JH Dunant 3, I-21100 Varese, Italy

Crespi, Elena
论文数: 0 引用数: 0
h-index: 0
机构:
Int Res Ctr D Amino Acids DAAIR, Via Lepetit 34, I-21040 Gerenzano, VA, Italy
Fdn Ist Insubr Ric Vita, Via Lepetit 34, I-21040 Gerenzano, VA, Italy Univ Insubria, Dept Biotechnol & Life Sci, Via JH Dunant 3, I-21100 Varese, Italy

Pollegioni, Loredano
论文数: 0 引用数: 0
h-index: 0
机构:
Univ Insubria, Dept Biotechnol & Life Sci, Via JH Dunant 3, I-21100 Varese, Italy
Int Res Ctr D Amino Acids DAAIR, Via Lepetit 34, I-21040 Gerenzano, VA, Italy Univ Insubria, Dept Biotechnol & Life Sci, Via JH Dunant 3, I-21100 Varese, Italy
[10]
Identification of a novel d-amino acid aminotransferase involved in d-glutamate biosynthetic pathways in the hyperthermophile Thermotoga maritima
[J].
Miyamoto, Tetsuya
;
Moriya, Toshiyuki
;
Katane, Masumi
;
Saitoh, Yasuaki
;
Sekine, Masae
;
Sakai-Kato, Kumiko
;
Oshima, Tairo
;
Homma, Hiroshi
.
FEBS JOURNAL,
2022, 289 (19)
:5933-5946

Miyamoto, Tetsuya
论文数: 0 引用数: 0
h-index: 0
机构:
Kitasato Univ, Grad Sch Pharmaceut Sci, Tokyo, Japan Kitasato Univ, Grad Sch Pharmaceut Sci, Tokyo, Japan

Moriya, Toshiyuki
论文数: 0 引用数: 0
h-index: 0
机构:
Kyowa Kako Co, Inst Environm Microbiol, Tokyo, Japan Kitasato Univ, Grad Sch Pharmaceut Sci, Tokyo, Japan

Katane, Masumi
论文数: 0 引用数: 0
h-index: 0
机构:
Kitasato Univ, Grad Sch Pharmaceut Sci, Tokyo, Japan Kitasato Univ, Grad Sch Pharmaceut Sci, Tokyo, Japan

Saitoh, Yasuaki
论文数: 0 引用数: 0
h-index: 0
机构:
Kitasato Univ, Grad Sch Pharmaceut Sci, Tokyo, Japan Kitasato Univ, Grad Sch Pharmaceut Sci, Tokyo, Japan

Sekine, Masae
论文数: 0 引用数: 0
h-index: 0
机构:
Kitasato Univ, Grad Sch Pharmaceut Sci, Tokyo, Japan Kitasato Univ, Grad Sch Pharmaceut Sci, Tokyo, Japan

Sakai-Kato, Kumiko
论文数: 0 引用数: 0
h-index: 0
机构:
Kitasato Univ, Grad Sch Pharmaceut Sci, Tokyo, Japan Kitasato Univ, Grad Sch Pharmaceut Sci, Tokyo, Japan

Oshima, Tairo
论文数: 0 引用数: 0
h-index: 0
机构:
Kyowa Kako Co, Inst Environm Microbiol, Tokyo, Japan Kitasato Univ, Grad Sch Pharmaceut Sci, Tokyo, Japan

论文数: 引用数:
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