Distinct immunological signatures discriminate severe COVID-19 from non-SARS-CoV-2-driven critical pneumonia

被引:78
作者
Kreutmair, Stefanie [1 ,2 ,3 ]
Unger, Susanne [1 ]
Nunez, Nicolas Gonzalo [1 ]
Ingelfinger, Florian [1 ]
Alberti, Chiara [1 ]
De Feo, Donatella [1 ]
Krishnarajah, Sinduya [1 ]
Kauffmann, Manuel [1 ]
Friebel, Ekaterina [1 ]
Babaei, Sepideh [4 ]
Gaborit, Benjamin [5 ]
Lutz, Mirjam [1 ]
Jurado, Nicole Puertas [1 ]
Malek, Nisar P. [4 ]
Goepel, Siri [4 ,6 ]
Rosenberger, Peter [7 ]
Haeberle, Helene A. [7 ]
Ayoub, Ikram [8 ]
Al-Hajj, Sally [8 ]
Nilsson, Jakob [9 ]
Claassen, Manfred [4 ]
Liblau, Roland [8 ]
Martin-Blondel, Guillaume [8 ,10 ]
Bitzer, Michael [4 ]
Roquilly, Antoine [5 ]
Becher, Burkhard [1 ]
机构
[1] Univ Zurich, Inst Expt Immunol, CH-8057 Zurich, Switzerland
[2] German Canc Consortium DKTK, D-79106 Freiburg, Germany
[3] German Canc Res Ctr, Partner Site Freiburg, D-79106 Freiburg, Germany
[4] Eberhard Karls Univ Tubingen, Dept Internal Med 1, D-72076 Tubingen, Germany
[5] Univ Nantes, Serv Anesthesie Reanimat Chirurg, CHU Nantes, Pole Anesthesie Reanimat, F-44093 Nantes, France
[6] German Ctr Infect Res DZIF, Partner Site Tuebingen, D-72076 Tubingen, Germany
[7] Eberhard Karls Univ Tubingen, Dept Anesthesiol & Intens Care Med, D-72076 Tubingen, Germany
[8] Univ Toulouse, CNRS, Toulouse Inst Infect & Inflammatory Dis, Inst Natl Sante & Rech Med,UPS, F-31024 Toulouse, France
[9] Univ Hosp Zurich, Dept Immunol, CH-8006 Zurich, Switzerland
[10] Toulouse Univ Hosp, Dept Infect & Trop Dis, F-31059 Toulouse, France
基金
瑞士国家科学基金会; 欧洲研究理事会;
关键词
T-CELLS; INFECTION; CYTOMETRY; RESPONSES; IMMUNE; MILD;
D O I
10.1016/j.immuni.2021.05.002
中图分类号
R392 [医学免疫学]; Q939.91 [免疫学];
学科分类号
100102 ;
摘要
Immune profiling of COVID-19 patients has identified numerous alterations in both innate and adaptive immunity. However, whether those changes are specific to SARS-CoV-2 or driven by a general inflammatory response shared across severely ill pneumonia patients remains unknown. Here, we compared the immune profile of severe COVID-19 with non-SARS-CoV-2 pneumonia ICU patients using longitudinal, high-dimensional single-cell spectral cytometry and algorithm-guided analysis. COVID-19 and non-SARS-CoV-2 pneumonia both showed increased emergency myelopoiesis and displayed features of adaptive immune paralysis. However, pathological immune signatures suggestive of T cell exhaustion were exclusive to COVID-19. The integration of single-cell profiling with a predicted binding capacity of SARS-CoV-2 peptides to the patients' HLA profile further linked the COVID-19 immunopathology to impaired virus recognition. Toward clinical translation, circulating NKT cell frequency was identified as a predictive biomarker for patient outcome. Our comparative immune map serves to delineate treatment strategies to interfere with the immunopathologic cascade exclusive to severe COVID-19.
引用
收藏
页码:1578 / +
页数:21
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