Signal Enhancement of Abiotically-Synthesized RNA Oligonucleotides and other Biopolymers using Unmodified Fused Silica in MALDI-MS

被引:3
|
作者
Cassidy, Lauren M. [1 ]
Dong, Yingying [1 ]
Joshi, Prakash C. [1 ]
Aldersley, Michael F. [1 ]
Ferris, James P. [1 ]
McGown, Linda B. [1 ]
机构
[1] Rensselaer Polytech Inst, New York Ctr Astrobiol, Dept Chem & Chem Biol, Troy, NY 12181 USA
关键词
MALDI-MS; RNA world; RNA; DNA; Heparin; Dextran; Prebiotic synthesis; Fused silica target; Biopolymers; DESORPTION/IONIZATION MASS-SPECTROMETRY; MONTMORILLONITE-CATALYZED FORMATION; SALDI-MS; DESORPTION; SURFACE;
D O I
10.1007/s13361-011-0113-0
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Metal is the standard desorption platform for MALDI-MS but other surfaces have been shown to offer advantages for particular types of analytes or applications. One such substrate is fused silica, which has been employed for matrix-free detection of low mass analytes and for affinity MALDI-MS in which binding ligands are immobilized at the fused silica surface. The present work reports improved MALDI-MS detection of RNA oligonucleotides, including polyA, polyU, and polyA/U, at the high end of the mass range when unmodified fused silica is used instead of stainless steel as the MALDI target. The RNA oligonucleotides were abiotically synthesized from activated monomers on catalytic clay surfaces. Further investigation found enhanced signals as well for other anionic biopolymers, including DNA oligonucleotides and heparin. Enhancement also was observed for dextran, which is neutral, indicating that the effect is not restricted to anionic biopolymers. Among more general analytical applications, the results are particularly relevant to rapid screening of abiotic RNA polymerization toward elucidating pathways to life on Earth.
引用
收藏
页码:1100 / 1104
页数:5
相关论文
共 2 条
  • [1] Potential Pitfalls in MALDI-TOF MS Analysis of Abiotically Synthesized RNA Oligonucleotides
    Bradley T. Burcar
    Lauren M. Cassidy
    Elizabeth M. Moriarty
    Prakash C. Joshi
    Kristin M. Coari
    Linda B. McGown
    Origins of Life and Evolution of Biospheres, 2013, 43 : 247 - 261
  • [2] Potential Pitfalls in MALDI-TOF MS Analysis of Abiotically Synthesized RNA Oligonucleotides
    Burcar, Bradley T.
    Cassidy, Lauren M.
    Moriarty, Elizabeth M.
    Joshi, Prakash C.
    Coari, Kristin M.
    McGown, Linda B.
    ORIGINS OF LIFE AND EVOLUTION OF BIOSPHERES, 2013, 43 (03): : 247 - 261