Impact of Deleterious Mutations on Structure, Function and Stability of Serum/Glucocorticoid Regulated Kinase 1: A Gene to Diseases Correlation

被引:12
作者
AlAjmi, Mohamed F. [1 ]
Khan, Shama [2 ]
Choudhury, Arunabh [3 ]
Mohammad, Taj [4 ]
Noor, Saba [4 ]
Hussain, Afzal [1 ]
Lu, Wenying [5 ]
Eapen, Mathew Suji [5 ]
Chimankar, Vrushali [6 ,7 ,8 ,9 ]
Hansbro, Philip M. [8 ,9 ]
Sohal, Sukhwinder Singh [5 ]
Elasbali, Abdelbaset Mohamed [10 ]
Hassan, Md Imtaiyaz [4 ]
机构
[1] King Saud Univ, Coll Pharm, Dept Pharmacognosy, Riyadh, Saudi Arabia
[2] Univ Cape Town, Drug Discovery & Dev Ctr H3D, Cape Town, South Africa
[3] Jamia Millia Islamia, Dept Comp Sci, New Delhi, India
[4] Jamia Millia Islamia, Ctr Interdisciplinary Res Basic Sci, New Delhi, India
[5] Univ Tasmania, Sch Hlth Sci, Dept Lab Med, Resp Translat Res Grp,Coll Hlth & Med, Launceston, Tas, Australia
[6] Centenary Inst, Ctr Inflammat, Sydney, NSW, Australia
[7] Univ Technol Sydney, Fac Sci, Sch Life Sci, Sydney, NSW, Australia
[8] Univ Newcastle, Prior Res Ctr Hlth Lungs, Newcastle, NSW, Australia
[9] Univ Newcastle, Hunter Med Res Inst, Newcastle, NSW, Australia
[10] Jouf Univ, Coll Appl Med Sci Qurayyat, Clin Lab Sci, Sakakah, Saudi Arabia
关键词
serum; glucocorticoid regulated kinase 1; deleterious mutations; single amino acid substitutions; molecular dynamics simulation; essential dynamics; AMINO-ACID SUBSTITUTIONS; UBIQUITIN LIGASE NEDD4-2; PROTEIN-KINASE; SERUM; SERVER; PREDICTION; VARIANTS; DYNAMICS; IDENTIFICATION; LOCALIZATION;
D O I
10.3389/fmolb.2021.780284
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Serum and glucocorticoid-regulated kinase 1 (SGK1) is a Ser/Thr protein kinase involved in regulating cell survival, growth, proliferation, and migration. Its elevated expression and dysfunction are reported in breast, prostate, hepatocellular, lung adenoma, and renal carcinomas. We have analyzed the SGK1 mutations to explore their impact at the sequence and structure level by utilizing state-of-the-art computational approaches. Several pathogenic and destabilizing mutations were identified based on their impact on SGK1 and analyzed in detail. Three amino acid substitutions, K127M, T256A, and Y298A, in the kinase domain of SGK1 were identified and incorporated structurally into original coordinates of SGK1 to explore their time evolution impact using all-atom molecular dynamic (MD) simulations for 200 ns. MD results indicate substantial conformational alterations in SGK1, thus its functional loss, particularly upon T256A mutation. This study provides meaningful insights into SGK1 dysfunction upon mutation, leading to disease progression, including cancer, and neurodegeneration.
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页数:14
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