miR-34 miRNAs Regulate Cellular Senescence in Type II Alveolar Epithelial Cells of Patients with Idiopathic Pulmonary Fibrosis

被引:106
作者
Disayabutr, Supparerk [1 ,6 ]
Kim, Eun Kyung [1 ,2 ]
Cha, Seung-Ick [1 ,3 ]
Green, Gary [1 ]
Naikawadi, Ram P. [1 ]
Jones, Kirk D. [4 ]
Golden, Jeffrey A. [1 ]
Schroeder, Aaron [1 ]
Matthay, Michael A. [1 ]
Kukreja, Jasleen [5 ]
Erle, David J. [1 ]
Collard, Harold R. [1 ]
Wolters, Paul J. [1 ]
机构
[1] Univ Calif San Francisco, Dept Med, Div Pulm Crit Care Allergy & Sleep Med, San Francisco, CA 94143 USA
[2] CHA Univ, Coll Med, CHA Bundang Med Ctr, Dept Internal Med, Songnam, South Korea
[3] Kyungpook Natl Univ Hosp, Dept Internal Med, Daegu, South Korea
[4] Univ Calif San Francisco, Dept Pathol, San Francisco, CA 94140 USA
[5] Univ Calif San Francisco, Dept Surg, San Francisco, CA USA
[6] Mahidol Univ, Siriraj Hosp, Fac Med, Div Resp Dis & TB,Dept Med, Bangkok, Thailand
来源
PLOS ONE | 2016年 / 11卷 / 06期
关键词
REPLICATIVE SENESCENCE; P53; EXPRESSION; BIOMARKER; CANCER; IDENTIFICATION; NORMALIZATION; PATHOGENESIS; ASSOCIATION; MUTATIONS;
D O I
10.1371/journal.pone.0158367
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Pathologic features of idiopathic pulmonary fibrosis (IPF) include genetic predisposition, activation of the unfolded protein response, telomere attrition, and cellular senescence. The mechanisms leading to alveolar epithelial cell (AEC) senescence are poorly understood. MicroRNAs (miRNAs) have been reported as regulators of cellular senescence. Senescence markers including p16, p21, p53, and senescence-associated beta-galactosidase (SA-beta gal) activity were measured in type II AECs from IPF lungs and unused donor lungs. miRNAs were quantified in type II AECs using gene expression arrays and quantitative RTPCR. Molecular markers of senescence (p16, p21, and p53) were elevated in IPF type II AECs. SA-beta gal activity was detected in a greater percentage in type II AECs isolated from IPF patients (23.1%) compared to patients with other interstitial lung diseases (1.2%) or normal controls (0.8%). The relative levels of senescence-associated miRNAs miR-34a, miR-34b, and miR-34c, but not miR-20a, miR-29c, or miR-let-7f were significantly higher in type II AECs from IPF patients. Overexpression of miR-34a, miR-34b, or miR-34c in lung epithelial cells was associated with higher SA-beta gal activity (27.8%, 35.1%, and 38.2%, respectively) relative to control treated cells (8.8%). Targets of miR-34 miRNAs, including E2F1, c-Myc, and cyclin E2, were lower in IPF type II AECs. These results show that markers of senescence are uniquely elevated in IPF type II AECs and suggest that the miR-34 family of miRNAs regulate senescence in IPF type II AECs.
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页数:15
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共 53 条
  • [1] Short telomeres are a risk factor for idiopathic pulmonary fibrosis
    Alder, Jonathan K.
    Chen, Julian J. -L.
    Lancaster, Lisa
    Danoff, Sonye
    Su, Shu-Chih
    Cogan, Joy D.
    Vulto, Irma
    Xie, Mingyi
    Qi, Xiaodong
    Tuder, Rubin M.
    Phillips, John A., III
    Lansdorp, Peter M.
    Loyd, James E.
    Armanios, Mary Y.
    [J]. PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2008, 105 (35) : 13051 - 13056
  • [2] Post-translational modifications and activation of p53 by genotoxic stresses
    Appella, E
    Anderson, CW
    [J]. EUROPEAN JOURNAL OF BIOCHEMISTRY, 2001, 268 (10): : 2764 - 2772
  • [3] Insufficient autophagy in idiopathic pulmonary fibrosis
    Araya, Jun
    Kojima, Jun
    Takasaka, Naoki
    Ito, Saburo
    Fujii, Satoko
    Hara, Hiromichi
    Yanagisawa, Haruhiko
    Kobayashi, Kenji
    Tsurushige, Chikako
    Kawaishi, Makoto
    Kamiya, Noriki
    Hirano, Jun
    Odaka, Makoto
    Morikawa, Toshiaki
    Nishimura, Stephen L.
    Kawabata, Yoshinori
    Hano, Hiroshi
    Nakayama, Katsutoshi
    Kuwano, Kazuyoshi
    [J]. AMERICAN JOURNAL OF PHYSIOLOGY-LUNG CELLULAR AND MOLECULAR PHYSIOLOGY, 2013, 304 (01) : L56 - L69
  • [4] Telomerase mutations in families with idiopathic pulmonary fibrosis
    Armanios, Mary Y.
    Chen, Julian J. -L.
    Cogan, Joy D.
    Alder, Jonathan K.
    Ingersoll, Roxann G.
    Markin, Cheryl
    Lawson, William E.
    Xie, Mingyi
    Vulto, Irma
    Phillips, John A., III
    Lansdorp, Peter M.
    Greider, Carol W.
    Loyd, James E.
    [J]. NEW ENGLAND JOURNAL OF MEDICINE, 2007, 356 (13) : 1317 - 1326
  • [5] Opposing roles for p16Ink4a and p19Arf in senescence and ageing caused by BubR1 insufficiency
    Baker, Darren J.
    Perez-Terzic, Carmen
    Jin, Fang
    Pitel, Kevin
    Niederlaender, Nicolas J.
    Jeganathan, Karthik
    Yamada, Satsuki
    Reyes, Santiago
    Rowe, Lois
    Hiddinga, H. Jay
    Eberhardt, Norman L.
    Terzic, Andre
    van Deursen, Jan M.
    [J]. NATURE CELL BIOLOGY, 2008, 10 (07) : 825 - 836
  • [6] A comparison of normalization methods for high density oligonucleotide array data based on variance and bias
    Bolstad, BM
    Irizarry, RA
    Åstrand, M
    Speed, TP
    [J]. BIOINFORMATICS, 2003, 19 (02) : 185 - 193
  • [7] MicroRNA-34a regulates cardiac ageing and function
    Boon, Reinier A.
    Iekushi, Kazuma
    Lechner, Stefanie
    Seeger, Timon
    Fischer, Ariane
    Heydt, Susanne
    Kaluza, David
    Treguer, Karine
    Carmona, Guillaume
    Bonauer, Angelika
    Horrevoets, Anton J. G.
    Didier, Nathalie
    Girmatsion, Zenawit
    Biliczki, Peter
    Ehrlich, Joachim R.
    Katus, Hugo A.
    Mueller, Oliver J.
    Potente, Michael
    Zeiher, Andreas M.
    Hermeking, Heiko
    Dimmeler, Stefanie
    [J]. NATURE, 2013, 495 (7439) : 107 - 110
  • [8] Cellular senescence: when bad things happen to good cells
    Campisi, Judith
    di Fagagna, Fabrizio d'Adda
    [J]. NATURE REVIEWS MOLECULAR CELL BIOLOGY, 2007, 8 (09) : 729 - 740
  • [9] Regulation of Myc by miR-34c A mechanism to prevent genomic instability?
    Cannell, Ian G.
    Bushell, Martin
    [J]. CELL CYCLE, 2010, 9 (14) : 2726 - 2730
  • [10] Cleaved cytokeratin-18 is a mechanistically informative biomarker in idiopathic pulmonary fibrosis
    Cha, Seung-Ick
    Ryerson, Christopher J.
    Lee, Joyce S.
    Kukreja, Jasleen
    Barry, Sophia S.
    Jones, Kirk D.
    Elicker, Brett M.
    Kim, Dong Soon
    Papa, Feroz R.
    Collard, Harold R.
    Wolters, Paul J.
    [J]. RESPIRATORY RESEARCH, 2012, 13