RNA-binding proteins and RNA methylation in myeloid cells*

被引:12
作者
Bataclan, Marian [1 ]
Leoni, Cristina [1 ]
Monticelli, Silvia [1 ]
机构
[1] Univ Svizzera Italiana, Inst Res Biomed, Via Vincenzo Vela 6, CH-6500 Bellinzona, Switzerland
基金
瑞士国家科学基金会;
关键词
m(6)A; mast cells; Myeloid cells; RNA methylation; RNA sensing; RNA-binding proteins; NECROSIS-FACTOR-ALPHA; MESSENGER-RNA; TNF-ALPHA; 3'-UNTRANSLATED REGION; IMMUNE-RESPONSES; STRUCTURAL BASIS; HUR; TRISTETRAPROLIN; M(6)A; EXPRESSION;
D O I
10.1111/imr.13025
中图分类号
R392 [医学免疫学]; Q939.91 [免疫学];
学科分类号
100102 ;
摘要
RNA-binding proteins (RBPs) regulate all aspects of the life of mRNA transcripts. They are critically important in regulating immune responses, most notably by restraining excessive inflammation that can potentially lead to tissue damage. RBPs are also crucial for pathogen sensing, for instance for the recognition of viral nucleic acids. Concordant with these central regulatory roles, the dysregulated activity of many RBPs can give rise to disease. The expression and function of RBPs are therefore highly controlled by an elaborate network of transcriptional, post-transcriptional and post-translational mechanisms, including the ability of different RBPs to cross-regulate each other's expression. With an emphasis on macrophages and mast cells, we review current knowledge on the role of selected RBPs that have been shown to directly impact the expression of inflammatory transcripts. By focusing specifically on proteins of the Regnase and ZFP36 family, as well as on factors involved in N-6-methyladenosine (m(6)A) deposition and recognition, we discuss mechanism of action, regulatory feedback, and impact of these selected proteins on immune responses. Finally, we include examples of the role of m(6)A and RBPs in the recognition of viral RNAs. Overall, we provide a general overview of the impact of selected RBPs on the myeloid compartment, followed by a discussion of outstanding questions and challenges for the future.
引用
收藏
页码:51 / 61
页数:11
相关论文
共 83 条
[51]   Translation-dependent unwinding of stem-loops by UPF1 licenses Regnase-1 to degrade inflammatory mRNAs [J].
Mino, Takashi ;
Iwai, Noriki ;
Endo, Masayuki ;
Inoue, Kentaro ;
Akaki, Kotaro ;
Hia, Fabian ;
Uehata, Takuya ;
Emura, Tomoko ;
Hidaka, Kumi ;
Suzuki, Yutaka ;
Standley, Daron M. ;
Okada-Hatakeyama, Mariko ;
Ohno, Shigeo ;
Sugiyama, Hiroshi ;
Yamashita, Akio ;
Takeuchi, Osamu .
NUCLEIC ACIDS RESEARCH, 2019, 47 (16) :8838-8859
[52]   Regnase-1 and Roquin Regulate a Common Element in Inflammatory mRNAs by Spatiotemporally Distinct Mechanisms [J].
Mino, Takashi ;
Murakawa, Yasuhiro ;
Fukao, Akira ;
Vandenbon, Alexis ;
Wessels, Hans-Hermann ;
Ori, Daisuke ;
Uehata, Takuya ;
Tartey, Sarang ;
Akira, Shizuo ;
Suzuki, Yutaka ;
Vinuesa, Carola G. ;
Ohler, Uwe ;
Standley, Daron M. ;
Landthaler, Markus ;
Fujiwara, Toshinobu ;
Takeuchi, Osamu .
CELL, 2015, 161 (05) :1058-1073
[53]  
Monticelli Silvia, 2017, F1000Res, V6, P2064, DOI 10.12688/f1000research.12384.1
[54]   Reading m6A in the Transcriptome: m6A-Binding Proteins [J].
Patil, Deepak P. ;
Pickering, Brian F. ;
Jaffrey, Samie R. .
TRENDS IN CELL BIOLOGY, 2018, 28 (02) :113-127
[55]   Arthritis suppressor genes TIA-1 and TTP dampen the expression of tumor necrosis factor α, cyclooxygenase 2, and inflammatory arthritis [J].
Phillips, K ;
Kedersha, N ;
Shen, L ;
Blackshear, PJ ;
Anderson, P .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2004, 101 (07) :2011-2016
[56]   Human Mast Cell Proteome Reveals Unique Lineage, Putative Functions, and Structural Basis for Cell Ablation [J].
Plum, Thomas ;
Wang, Xi ;
Rettel, Mandy ;
Krijgsveld, Jeroen ;
Feyerabend, Thorsten B. ;
Rodewald, Hans-Reimer .
IMMUNITY, 2020, 52 (02) :404-+
[57]   Myeloid-Specific Tristetraprolin Deficiency in Mice Results in Extreme Lipopolysaccharide Sensitivity in an Otherwise Minimal Phenotype [J].
Qiu, Lian-Qun ;
Stumpo, Deborah J. ;
Blackshear, Perry J. .
JOURNAL OF IMMUNOLOGY, 2012, 188 (10) :5150-5159
[58]   N6-methyladenosine RNA modification suppresses antiviral innate sensing pathways via reshaping double-stranded RNA [J].
Qiu, Weinan ;
Zhang, Qingyang ;
Zhang, Rui ;
Lu, Yangxu ;
Wang, Xin ;
Tian, Huabin ;
Yang, Ying ;
Gu, Zijuan ;
Gao, Yanan ;
Yang, Xin ;
Cui, Guanshen ;
Sun, Baofa ;
Peng, Yanan ;
Deng, Hongyu ;
Peng, Hua ;
Yang, Angang ;
Yang, Yun-Gui ;
Yang, Pengyuan .
NATURE COMMUNICATIONS, 2021, 12 (01)
[59]   Dominant Suppression of Inflammation via Targeted Mutation of the mRNA Destabilizing Protein Tristetraprolin [J].
Ross, Ewan A. ;
Smallie, Tim ;
Ding, Qize ;
O'Neil, John D. ;
Cunliffe, Helen E. ;
Tang, Tina ;
Rosner, Dalya R. ;
Klevernic, Iva ;
Morrice, Nicholas A. ;
Monaco, Claudia ;
Cunningham, Adam F. ;
Buckley, Christopher D. ;
Saklatvala, Jeremy ;
Dean, Jonathan L. ;
Clark, Andrew R. .
JOURNAL OF IMMUNOLOGY, 2015, 195 (01) :265-276
[60]   Dynamic Post-Transcriptional Events Governing CD8+ T Cell Homeostasis and Effector Function [J].
Salerno, Fiamma ;
Turner, Martin ;
Wolkers, Monika C. .
TRENDS IN IMMUNOLOGY, 2020, 41 (03) :240-254