Extracting ROI-Based Contourlet Subband Energy Feature From the sMRI Image for Alzheimer's Disease Classification

被引:15
作者
Feng, Jinwang [1 ]
Zhang, Shao-Wu [1 ]
Chen, Luonan [1 ,2 ,3 ,4 ]
机构
[1] Northwestern Polytech Univ, Sch Automat, Key Lab Informat Fus Technol, Minist Educ, Xian 710072, Peoples R China
[2] Chinese Acad Sci, Ctr Excellence Mol Cell Sci, Shanghai Inst Biochem & Cell Biol, Key Lab Syst Biol, Shanghai 200031, Peoples R China
[3] Univ Chinese Acad Sci, Chinese Acad Emy Sci, Hangzhou Inst Adv Study, Key Lab Syst Biol, Hangzhou 310024, Peoples R China
[4] ShanghaiTech Univ, Sch Life Sci & Technol, Shanghai 201210, Peoples R China
基金
美国国家卫生研究院; 加拿大健康研究院; 中国国家自然科学基金;
关键词
Feature extraction; Diseases; Databases; Transforms; Alzheimer's disease; Image segmentation; Frequency-domain analysis; image classification; regions of interest; contourlet transform; subband energy feature; PRINCIPAL COMPONENT ANALYSIS; MILD COGNITIVE IMPAIRMENT; FEATURE-SELECTION; MRI; DIAGNOSIS; PREDICTION; MACHINE; PATTERNS; ATROPHY; PET;
D O I
10.1109/TCBB.2021.3051177
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Structural magnetic resonance imaging (sMRI)-based Alzheimer's disease (AD) classification and its prodromal stage-mild cognitive impairment (MCI) classification have attracted many attentions and been widely investigated in recent years. Owing to the high dimensionality, representation of the sMRI image becomes a difficult issue in AD classification. Furthermore, regions of interest (ROI) reflected in the sMRI image are not characterized properly by spatial analysis techniques, which has been a main cause of weakening the discriminating ability of the extracted spatial feature. In this study, we propose a ROI-based contourlet subband energy (ROICSE) feature to represent the sMRI image in the frequency domain for AD classification. Specifically, a preprocessed sMRI image is first segmented into 90 ROIs by a constructed brain mask. Instead of extracting features from the 90 ROIs in the spatial domain, the contourlet transform is performed on each of these ROIs to obtain their energy subbands. And then for an ROI, a subband energy (SE) feature vector is constructed to capture its energy distribution and contour information. Afterwards, SE feature vectors of the 90 ROIs are concatenated to form a ROICSE feature of the sMRI image. Finally, support vector machine (SVM) classifier is used to classify 880 subjects from ADNI and OASIS databases. Experimental results show that the ROICSE approach outperforms six other state-of-the-art methods, demonstrating that energy and contour information of the ROI are important to capture differences between the sMRI images of AD and HC subjects. Meanwhile, brain regions related to AD can also be found using the ROICSE feature, indicating that the ROICSE feature can be a promising assistant imaging marker for the AD diagnosis via the sMRI image. Code and Sample IDs of this paper can be downloaded at https://github.com/NWPU-903PR/ROICSE.git.
引用
收藏
页码:1627 / 1639
页数:13
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