Interplay between Metabolism and Epigenetics: A Nuclear Adaptation to Environmental Changes

被引:344
作者
Etchegaray, Jean-Pierre [1 ,2 ]
Mostoslavsky, Raul [1 ,2 ,3 ]
机构
[1] Harvard Univ, Massachusetts Gen Hosp, Sch Med, Ctr Canc, Boston, MA 02114 USA
[2] Harvard Univ, Sch Med, MGH Ctr Regenerat Med, Boston, MA 02114 USA
[3] Broad Inst Harvard & MIT, Cambridge, MA 02142 USA
关键词
REV-ERB-ALPHA; RNA-POLYMERASE-II; HISTONE DEACETYLASE SIRT6; EMBRYONIC STEM-CELLS; O-GLCNAC TRANSFERASE; CONTROLLING MITOCHONDRIAL BIOGENESIS; S-ADENOSYLMETHIONINE SYNTHETASE; CIRCADIAN GENE-EXPRESSION; ACUTE MYELOID-LEUKEMIA; VITAMIN-C;
D O I
10.1016/j.molcel.2016.05.029
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The physiological identity of every cell is maintained by highly specific transcriptional networks that establish a coherent molecular program that is in tune with nutritional conditions. The regulation of cell-specific transcriptional networks is accomplished by an epigenetic program via chromatin-modifying enzymes, whose activity is directly dependent on metabolites such as acetyl-coenzyme A, S-adenosylmethionine, and NAD+, among others. Therefore, these nuclear activities are directly influenced by the nutritional status of the cell. In addition to nutritional availability, this highly collaborative program between epigenetic dynamics and metabolism is further interconnected with other environmental cues provided by the day-night cycles imposed by circadian rhythms. Herein, we review molecular pathways and their metabolites associated with epigenetic adaptations modulated by histone- and DNA-modifying enzymes and their responsiveness to the environment in the context of health and disease.
引用
收藏
页码:695 / 711
页数:17
相关论文
共 210 条
[1]   NAD+-SIRT1 control of H3K4 trimethylation through circadian deacetylation of MLL1 [J].
Aguilar-Arnal, Lorena ;
Katada, Sayako ;
Orozco-Solis, Ricardo ;
Sassone-Corsi, Paolo .
NATURE STRUCTURAL & MOLECULAR BIOLOGY, 2015, 22 (04) :312-U60
[2]   Circadian cycling of the mouse liver transcriptome, as revealed by cDNA microarray, is driven by the suprachiasmatic nucleus [J].
Akhtar, RA ;
Reddy, AB ;
Maywood, ES ;
Clayton, JD ;
King, VM ;
Smith, AG ;
Gant, TW ;
Hastings, MH ;
Kyriacou, CP .
CURRENT BIOLOGY, 2002, 12 (07) :540-550
[3]   Targeted killing of a mammalian cell based upon its specialized metabolic state [J].
Alexander, Peter B. ;
Wang, Jian ;
McKnight, Steven L. .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2011, 108 (38) :15828-15833
[4]   MYC Disrupts the Circadian Clock and Metabolism in Cancer Cells [J].
Altman, Brian J. ;
Hsieh, Annie L. ;
Sengupta, Arjun ;
Krishnanaiah, Saikumari Y. ;
Stine, Zachary E. ;
Walton, Zandra E. ;
Gouw, Arvin M. ;
Venkataraman, Anand ;
Li, Bo ;
Goraksha-Hicks, Pankuri ;
Diskin, Sharon J. ;
Bellovin, David I. ;
Simon, M. Celeste ;
Rathmell, Jeffrey C. ;
Lazar, Mitchell A. ;
Maris, John M. ;
Felsher, Dean W. ;
Hogenesch, John B. ;
Weljie, Aalim M. ;
Dang, Chi V. .
CELL METABOLISM, 2015, 22 (06) :1009-1019
[5]   SIRT1 regulates circadian clock gene expression through PER2 deacetylation [J].
Asher, Gad ;
Gatfield, David ;
Stratmann, Markus ;
Reinke, Hans ;
Dibner, Charna ;
Kreppel, Florian ;
Mostoslavsky, Raul ;
Alt, Frederick W. ;
Schibler, Ueli .
CELL, 2008, 134 (02) :317-328
[6]   Germline SDHD mutation in familial phaeochromocytoma [J].
Astuti, D ;
Douglas, F ;
Lennard, TWJ ;
Aligianis, IA ;
Woodward, ER ;
Evans, DGR ;
Eng, C ;
Latif, F ;
Maher, ER .
LANCET, 2001, 357 (9263) :1181-1182
[7]   Regulation of chromatin by histone modifications [J].
Bannister, Andrew J. ;
Kouzarides, Tony .
CELL RESEARCH, 2011, 21 (03) :381-395
[8]   SIRT7 links H3K18 deacetylation to maintenance of oncogenic transformation [J].
Barber, Matthew F. ;
Michishita-Kioi, Eriko ;
Xi, Yuanxin ;
Tasselli, Luisa ;
Kioi, Mitomu ;
Moqtaderi, Zarmik ;
Tennen, Ruth I. ;
Paredes, Silvana ;
Young, Nicolas L. ;
Chen, Kaifu ;
Struhl, Kevin ;
Garcia, Benjamin A. ;
Gozani, Or ;
Li, Wei ;
Chua, Katrin F. .
NATURE, 2012, 487 (7405) :114-+
[9]   Phosphorylation of TET Proteins Is Regulated via O-GlcNAcylation by the O-Linked N-Acetylglucosamine Transferase (OGT) [J].
Bauer, Christina ;
Goebel, Klaus ;
Nagaraj, Nagarjuna ;
Colantuoni, Christian ;
Wang, Mengxi ;
Mueller, Udo ;
Kremmer, Elisabeth ;
Rottach, Andrea ;
Leonhardt, Heinrich .
JOURNAL OF BIOLOGICAL CHEMISTRY, 2015, 290 (08) :4801-4812
[10]   SDHAF2 mutations in familial and sporadic paraganglioma and phaeochromocytoma [J].
Bayley, Jean-Pierre ;
Kunst, Henricus P. M. ;
Cascon, Alberto ;
Sampietro, Maria Lourdes ;
Gaal, Jose ;
Korpershoek, Esther ;
Hinojar-Gutierrez, Adolfo ;
Timmers, Henri J. L. M. ;
Hoefsloot, Lies H. ;
Hermsen, Mario A. ;
Suarez, Carlos ;
Hussain, A. Karim ;
Vriends, Annette H. J. T. ;
Hes, Frederik J. ;
Jansen, Jeroen C. ;
Tops, Carli M. ;
Corssmit, Eleonora P. ;
de Knijff, Peter ;
Lenders, Jacques W. M. ;
Cremers, Cor W. R. J. ;
Devilee, Peter ;
Dinjens, Winand N. M. ;
de Krijger, Ronald R. ;
Robledo, Mercedes .
LANCET ONCOLOGY, 2010, 11 (04) :366-372