AraC protein, regulation of the l-arabinose operon in Escherichia coli, and the light switch mechanism of AraC action

被引:195
作者
Schleif, Robert [1 ]
机构
[1] Johns Hopkins Univ, Dept Biol, Baltimore, MD 21218 USA
关键词
allostery; transcription initiation; RNA polymerase; solubility; fluorescence; homology; fucose; DNA-BINDING DOMAIN; TRANSCRIPTION START SITE; AMP RECEPTOR PROTEIN; AMINO-ACID CONTACTS; GEL-ELECTROPHORESIS; BETA-GALACTOSIDASE; INDUCTION KINETICS; CRYSTAL-STRUCTURE; LAC REPRESSOR; IN-VIVO;
D O I
10.1111/j.1574-6976.2010.00226.x
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
This review covers the physiological aspects of regulation of the arabinose operon in Escherichia coli and the physical and regulatory properties of the operon's controlling gene, araC. It also describes the light switch mechanism as an explanation for many of the protein's properties. Although many thousands of homologs of AraC exist and regulate many diverse operons in response to many different inducers or physiological states, homologs that regulate arabinose-catabolizing genes in response to arabinose were identified. The sequence similarities among them are discussed in light of the known structure of the dimerization and DNA-binding domains of AraC.
引用
收藏
页码:779 / 796
页数:18
相关论文
共 100 条
[11]   Roles of effectors in XylS-dependent transcription activation:: Intramolecular domain derepression and DNA binding [J].
Dominguez-Cuevas, Patricia ;
Marin, Patricia ;
Busby, Stephen ;
Ramos, Juan L. ;
Marques, Silvia .
JOURNAL OF BACTERIOLOGY, 2008, 190 (09) :3118-3128
[12]   AN OPERATOR AT -280 BASE-PAIRS THAT IS REQUIRED FOR REPRESSION OF ARABAD OPERON PROMOTER - ADDITION OF DNA HELICAL TURNS BETWEEN THE OPERATOR AND PROMOTER CYCLICALLY HINDERS REPRESSION [J].
DUNN, TM ;
HAHN, S ;
OGDEN, S ;
SCHLEIF, RF .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA-BIOLOGICAL SCIENCES, 1984, 81 (16) :5017-5020
[13]   DELETION ANALYSIS OF THE ESCHERICHIA-COLI ARA-PC AND PBAD PROMOTERS [J].
DUNN, TM ;
SCHLEIF, R .
JOURNAL OF MOLECULAR BIOLOGY, 1984, 180 (01) :201-204
[14]   DNA-DEPENDENT RENATURATION OF AN INSOLUBLE DNA-BINDING PROTEIN - IDENTIFICATION OF THE RHAS BINDING-SITE AT RHABAD [J].
EGAN, SM ;
SCHLEIF, RF .
JOURNAL OF MOLECULAR BIOLOGY, 1994, 243 (05) :821-829
[15]   L-ARABINOSE OPERON IN ESCHERICHIA COLI B/R - A GENETIC DEMONSTRATION OF TWO FUNCTIONAL STATES OF PRODUCT OF A REGULATOR GENE [J].
ENGLESBE.E ;
SQUIRES, C ;
MERONK, F .
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 1969, 62 (04) :1100-&
[16]   POSITIVE CONTROL OF ENZYME SYNTHESIS BY GENE C IN L-ARABINOSE SYSTEM [J].
ENGLESBE.E ;
IRR, J ;
POWER, J ;
LEE, N .
JOURNAL OF BACTERIOLOGY, 1965, 90 (04) :946-&
[17]   AN ANALYSIS OF REVERTANTS OF A DELETION MUTANT IN C GENE OF L-ARABINOSE GENE COMPLEX IN ESCHERICHIA COLI B/R - ISOLATION OF INITIATOR CONSTITUTIVE MUTANTS (IC) [J].
ENGLESBERG, E ;
SHEPPARD, D ;
SQUIRES, C ;
MERONK, F .
JOURNAL OF MOLECULAR BIOLOGY, 1969, 43 (02) :281-+
[18]   ENZYMATIC CHARACTERIZATION OF 17 L-ARABINOSE NEGATIVE MUTANTS OF ESCHERICHIA COLI [J].
ENGLESBERG, E .
JOURNAL OF BACTERIOLOGY, 1961, 81 (06) :996-+
[19]  
EUSTANCE RJ, 1994, J MOL BIOL, V242, P330
[20]   A DNA-Assisted Binding Assay for Weak Protein-Protein Interactions [J].
Frato, Katherine E. ;
Schleif, Robert F. .
JOURNAL OF MOLECULAR BIOLOGY, 2009, 394 (05) :805-814