Structural genomic workflows supported by web services

被引：6

作者：

Cavalcanti, MC ^{[1
]}

Baiao, F ^{[1
]}

Rössle, SC ^{[1
]}

Bisch, PM ^{[1
]}

Targino, R ^{[1
]}

Pires, PF ^{[1
]}

Campos, ML ^{[1
]}

Mattoso, M ^{[1
]}

机构：

[1] Univ Fed Rio de Janeiro, Dept Comp Sci, COPPE, IM, BR-21941 Rio De Janeiro, Brazil

来源：

14TH INTERNATIONAL WORKSHOP ON DATABASE AND EXPERT SYSTEMS APPLICATIONS, PROCEEDINGS | 2003年

关键词：

D O I：

10.1109/DEXA.2003.1231996

中图分类号：

TP18 [人工智能理论];

学科分类号：

081104 ; 0812 ; 0835 ; 1405 ;

摘要：

In silico experiments encompass multiple combinations of program and data resources, which are complex to be managed. Typically, script languages are used due to their ease of use, despite their specificity and difficulty of reuse. In contrast, web service technology was specially conceived to encapsulate and combine programs and data, providing interoperation between applications from different platforms. This approach is superior to scripts with regard to interoperability, scalability and flexibility issues. We have combined metadata support with web services within a framework that supports scientific workflows. We have experimented this framework with a real structural genomic workflow, showing its viability and evidencing its advantages.

引用

页码：45 / 49

页数：5

共 17 条

[1]

[Anonymous], WEB SERV DESCR LANG

[2]

Ashburner M, 2002, NOVART FDN SYMP, V247, P66

[3]

Cavalcanti M. C., 2002, P ACM S APPL COMP MA, P453

[4] An architecture for managing distributed scientific resources [J].

Cavalcariti, MC ;

Mattoso, M ;

Campos, ML ;

Simon, E ;

Llirbat, F .

14TH INTERNATIONAL CONFERENCE ON SCIENTIFIC AND STATISTICAL DATABASE MANAGEMENT, PROCEEDINGS, 2002, :47-55

[5]

Curbera F, 2002, BUSINESS PROCESS EXE

[6]

Goble C, 2002, SIGMOD REC, V31, P65, DOI 10.1145/637411.637422

[7]

*IBM, BPWS4J IBM

[8] PROCHECK - A PROGRAM TO CHECK THE STEREOCHEMICAL QUALITY OF PROTEIN STRUCTURES [J].

LASKOWSKI, RA ;

MACARTHUR, MW ;

MOSS, DS ;

THORNTON, JM .

JOURNAL OF APPLIED CRYSTALLOGRAPHY, 1993, 26 :283-291

[9]

ROCCO D, 2002, UCRLJC149963 LAWR LI

[10]

ROSSLE S, 2002, COMPUTATIONAL ENV DE

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