Impact of the implementation of MPI point-to-point communications on the performance of two general sparse solvers

被引:8
作者
Amestoy, PR
Duff, IS
L'Excellent, JY
Li, XYS
机构
[1] Ecole Normale Super Lyon, INRIA Rhone Alpes, CNRS, URM 5668, F-69364 Lyon 07, France
[2] Ecole Normale Super Lyon, CNRS, Lab Informat Parallelisme, UMR 5668, F-69364 Lyon, France
[3] IRIT, ENSEEIHT, F-31071 Toulouse, France
[4] Lawrence Berkeley Natl Lab, NERSC, Berkeley, CA 94720 USA
[5] Rutherford Appleton Lab, Didcot OX11 0QX, Oxon, England
关键词
MPI; message passing; immediate communication primitives; direct solvers; sparse matrices;
D O I
10.1016/S0167-8191(03)00067-X
中图分类号
TP301 [理论、方法];
学科分类号
081202 ;
摘要
We examine the send and receive mechanisms of MPI and show how to implement message passing robustly so that performance is not significantly affected by changes to the MPI system. We discuss this within the context of two different parallel algorithms for sparse Gaussian elimination: a multifrontal solver (MUMPS), and a supernodal one (SuperLU). The performance of our initial strategies based on simple MPI point-to-point communication primitives is very sensitive to the MPI system, particularly the way MPI buffers are used. Using nonblocking communication primitives improves the performance and robustness, but at the cost of increased code complexity. (C) 2003 Elsevier Science B.V. All rights reserved.
引用
收藏
页码:833 / 849
页数:17
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