One of the contributing factors to generation of off-Flavours in soy protein isolate (SPI) during storage is autoxidation of residual amounts of phospholipids present in SPI. Thus, removal of phospholipids from SPI is a likely first step to improve its Flavour stability and enhanced utilisation of SPI in food products. We describe a beta-cyclodextrin-based (beta CD) process to remove protein-bound phospholipids and free fatty acids in SPI. Treating SPI solution (8%) with 10 mM beta CD alone at pH 8.0 decreased the phospholipid content of SPI by about 36%. A greater than 99% removal of phospholipids and free fatty acids was achieved by using a combination of treatments involving sonication of the SPI solution for 5 min at 50 degrees C followed by treatment with phospholipase A(2) and beta CD. SPI prepared by this method was white in colour. The results presented here offer a process for removing residual off-Flavour causing phospholipids from soy protein. (C) 2011 Elsevier Ltd. All rights reserved.