Characterization of the complete chloroplast genome of Fraxinus mandshurica (Oleaceae)

被引：3

作者：

Zhao, Yuemei ^{[1
]}

Zhou, Tao ^{[2
]}

Zhang, Xiao ^{[3
]}

Chen, Xiaodan ^{[3
]}

Bai, Guoqing ^{[4
]}

机构：

[1] Shangluo Univ, Coll Biopharmaceut & Food Engn, Shangluo, Peoples R China

[2] Xi An Jiao Tong Univ, Sch Pharm, Xian, Shaanxi, Peoples R China

[3] Northwest Univ, Coll Life Sci, Key Lab Resource Biol & Biotechnol Western China, Minist Educ, Xian, Shaanxi, Peoples R China

[4] Xian Bot Garden Shaanxi Prov, Shaanxi Engn Res Ctr Conservat & Utilizat Bot Res, Xian, Shaanxi, Peoples R China

来源：

MITOCHONDRIAL DNA PART B-RESOURCES | 2018年 / 3卷 / 02期

关键词：

Fraxinus mandshurica; chloroplast; Illumina sequencing; phylogenetic analysis;

D O I：

10.1080/23802359.2018.1532833

中图分类号：

Q3 [遗传学];

学科分类号：

071007 ; 090102 ;

摘要：

The whole chloroplast (cp) genome sequence of Fraxinus mandshurica has been characterized from Illumina pair-end sequencing. The complete cp genome was 155,530bp in length, containing a large single copy region (LSC) of 86,415bp and a small single copy region (SSC) of 19,279bp, which were separated by a pair of inverted repeat (IR) regions of 25,653bp. The genome contained 133 genes, including 88 protein-coding genes, 37 tRNA genes and eight ribosomal RNA genes (four rRNA species). Most genes occur as a single copy, while 19 gene species are duplicated. phylogenetic analysis revealed that F. mandshurica is closely related to the species of F. chiisanensis and F. excelsior.

引用

页码：1270 / 1271

页数：2

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