Constrained Watershed Method to Infer Morphology of Mammalian Cells in Microscopic Images

被引:4
作者
Kachouie, Nezamoddin N. [1 ,2 ,3 ]
Fieguth, Paul [1 ]
Gamble, Darik [4 ,5 ]
Jervis, Eric [4 ]
Ezziane, Zoheir [6 ,7 ]
Khademhosseini, Ali [2 ,3 ]
机构
[1] Univ Waterloo, Dept Syst Design Engn, Waterloo, ON N2L 3G1, Canada
[2] Harvard Univ, Brigham & Womens Hosp, Sch Med, Ctr Biomed Engn,Dept Med, Boston, MA 02115 USA
[3] MIT, Harvard Mit Div Hlth Sci & Technol, Cambridge, MA 02139 USA
[4] Univ Waterloo, Dept Chem Engn, Waterloo, ON N2L 3G1, Canada
[5] Johns Hopkins Univ, Dept Biomed Engn, Baltimore, MD USA
[6] Harvard Univ, Sch Med, Dept Genet, Boston, MA USA
[7] Higher Coll Technol, Technol Womens Coll, Dept Informat Technol, Al Ain, U Arab Emirates
关键词
microscopic image sequence; hematopoietic stem cell; cell uropodia; automated cell shape analysis; watershed segmentation; inverse problem; biomedical image analysis; HEMATOPOIETIC STEM; CELLULAR-DYNAMICS; DECONVOLUTION; TERM;
D O I
10.1002/cyto.a.20951
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Precise information about the size, shape, temporal dynamics, and spatial distribution of cells is beneficial for the understanding of cell behavior and may play a key role in drug development, regenerative medicine, and disease research. The traditional method of manual observation and measurement of cells from microscopic images is tedious, expensive, and time consuming. Thus, automated methods are in high demand, especially given the increasing quantity of cell data being collected. In this article, an automated method to measure cell morphology from microscopic images is proposed to outline the boundaries of individual hematopoietic stem cells (HSCs). The proposed method outlines the cell regions using a constrained watershed method which is derived as an inverse problem. The experimental results generated by applying the proposed method to different HSC image sequences showed robust performance to detect and segment individual and dividing cells. The performance of the proposed method for individual cell segmentation for single frame high-resolution images was more than 97%, and decreased slightly to 90% for low-resolution multiframe stitched images. (C) 2010 International Society for Advancement of Cytometry
引用
收藏
页码:1148 / 1159
页数:12
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