Complete nucleotide sequences of a new bipartite begomovirus from Malvastrum sp plants with bright yellow mosaic symptoms in South Texas

被引:6
作者
Alabi, Olufemi J. [1 ]
Villegas, Cecilia [2 ]
Gregg, Lori [1 ]
Murray, K. Daniel [2 ]
机构
[1] Texas A&M AgriLife Res & Extens Ctr, Dept Plant Pathol & Microbiol, Weslaco, TX 78596 USA
[2] South Texas Coll, Mcallen, TX 78501 USA
基金
美国农业部;
关键词
INFECTING BEGOMOVIRUS; VIRUS; SIDA;
D O I
10.1007/s00705-016-2821-z
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
Two isolates of a novel bipartite begomovirus, tentatively named malvastrum bright yellow mosaic virus (MaBYMV), were molecularly characterized from naturally infected plants of the genus Malvastrum showing bright yellow mosaic disease symptoms in South Texas. Six complete DNA-A and five DNA-B genome sequences of MaBYMV obtained from the isolates ranged in length from 2,608 to 2,609 nucleotides (nt) and 2,578 to 2,605 nt, respectively. Both genome segments shared a 178- to 180-nt common region. In pairwise comparisons, the complete DNA-A and DNA-B sequences of MaBYMV were most similar (87-88 % and 79-81 % identity, respectively) and phylogenetically related to the corresponding sequences of sida mosaic Sinaloa virus-[MX-Gua-06]. Further analysis revealed that MaBYMV is a putative recombinant virus, thus supporting the notion that malvaceous hosts may be influencing the evolution of several begomoviruses. The design of new diagnostic primers enabled the detection of MaBYMV in cohorts of Bemisia tabaci collected from symptomatic Malvastrum sp. plants, thus implicating whiteflies as potential vectors of the virus.
引用
收藏
页码:1729 / 1733
页数:5
相关论文
共 13 条
[1]   Alternate hosts of African cassava mosaic virus and East African cassava mosaic Cameroon virus in Nigeria [J].
Alabi, Olufemi J. ;
Ogbe, Francis O. ;
Bandyopadhyay, Ranajit ;
Kumar, P. Lava ;
Dixon, Alfred G. O. ;
Hughes, Jaqueline d'A. ;
Naidu, Rayapati A. .
ARCHIVES OF VIROLOGY, 2008, 153 (09) :1743-1747
[2]   Tomato yellow spot virus, a tomato-infecting begomovirus from Brazil with a closer relationship to viruses from Sida sp., forms pseudorecombinants with begomoviruses from tomato but not from Sida [J].
Andrade, E. C. ;
Manhani, G. G. ;
Alfenas, P. F. ;
Calegario, R. F. ;
Fontes, E. P. B. ;
Zerbini, F. M. .
JOURNAL OF GENERAL VIROLOGY, 2006, 87 :3687-3696
[3]  
Brown J. K., 2012, VIRUS TAXONOMY, P351
[4]   Revision of Begomovirus taxonomy based on pairwise sequence comparisons [J].
Brown, Judith K. ;
Zerbini, F. Murilo ;
Navas-Castillo, Jesus ;
Moriones, Enrique ;
Ramos-Sobrinho, Roberto ;
Silva, Jose C. F. ;
Fiallo-Olive, Elvira ;
Briddon, Rob W. ;
Hernandez-Zepeda, Cecilia ;
Idris, Ali ;
Malathi, V. G. ;
Martin, Darren P. ;
Rivera-Bustamante, Rafael ;
Ueda, Shigenori ;
Varsani, Arvind .
ARCHIVES OF VIROLOGY, 2015, 160 (06) :1593-1619
[5]  
Dellaporta S.L., 1983, Plant Mol BiolRep, V1, P19, DOI [10.1007/BF02712670, DOI 10.1007/BF02712670]
[6]   Complete nucleotide sequences of two new begomoviruses infecting the wild malvaceous plant Melochia sp in Brazil [J].
Fiallo-Olive, Elvira ;
Murilo Zerbini, F. ;
Navas-Castillo, Jesus .
ARCHIVES OF VIROLOGY, 2015, 160 (12) :3161-3164
[7]  
Hall T.A., 1999, IOC world bird list (version 11.1), DOI [10.1021/bk-1999-0734.ch008, DOI 10.14344/IOC.ML.11.1, DOI 10.1021/BK-1999-0734.CH008]
[8]   A Two-Locus Global DNA Barcode for Land Plants: The Coding rbcL Gene Complements the Non-Coding trnH-psbA Spacer Region [J].
Kress, W. John ;
Erickson, David L. .
PLOS ONE, 2007, 2 (06)
[9]   RDP3: a flexible and fast computer program for analyzing recombination [J].
Martin, Darren P. ;
Lemey, Philippe ;
Lott, Martin ;
Moulton, Vincent ;
Posada, David ;
Lefeuvre, Pierre .
BIOINFORMATICS, 2010, 26 (19) :2462-+
[10]  
MUHIRE BM, 2014, PLOS ONE, V9, DOI DOI 10.1371/JOURNAL.PONE.0108277