Implications of genotypic differences in the generation of a urinary metabolomics radiation signature

被引:21
|
作者
Laiakis, Evagelia C. [1 ]
Pannkuk, Evan L. [1 ]
Diaz-Rubio, Maria Elena [2 ]
Wang, Yi-Wen [1 ]
Mak, Tytus D. [3 ]
Simbulan-Rosenthal, Cynthia M. [1 ]
Brenner, David J. [4 ]
Fornace, Albert J., Jr. [1 ,5 ,6 ]
机构
[1] Georgetown Univ, Dept Biochem & Mol & Cellular Biol, Washington, DC 20057 USA
[2] Univ Arkansas Med Sci, Div Dev Nutr, Pediat, Little Rock, AR 72205 USA
[3] NIST, Mass Spectrometry Data Ctr, Gaithersburg, MD 20899 USA
[4] Columbia Univ, New York, NY USA
[5] Georgetown Univ, Lombardi Comprehens Canc Ctr, Washington, DC 20057 USA
[6] King Abdulaziz Univ, Ctr Excellence Genom Med Res CEGMR, Jeddah 22254, Saudi Arabia
基金
美国国家卫生研究院;
关键词
Metabolomics; DNA repair; Urine; Ionizing radiation; Biomarkers; IONIZING-RADIATION; POLY(ADP-RIBOSE) POLYMERASE; NONHUMAN-PRIMATES; GAMMA-RADIATION; EXPOSURE; PARP-1; BIOMARKERS; MICE; IDENTIFICATION; CANCER;
D O I
10.1016/j.mrfmmm.2016.03.003
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
The increased threat of radiological terrorism and accidental nuclear exposures, together with increased usage of radiation-based medical procedures, has made necessary the development of minimally invasive methods for rapid identification of exposed individuals. Genetically predisposed radiosensitive individuals comprise a significant number of the population and require specialized attention and treatments after such events. Metabolomics, the assessment of the collective small molecule content in a given biofluid or tissue, has proven effective in the rapid identification of radiation biomarkers and metabolic perturbations. To investigate how the genotypic background may alter the ionizing radiation (IR) signature, we analyzed urine from Parp1(-/-) mice, as a model radiosensitive genotype, exposed to IR by utilizing the analytical power of liquid chromatography coupled with mass spectrometry (LC-MS), as urine has been thoroughly investigated in wild type (WT) mice in previous studies from our laboratory. Samples were collected at days one and three after irradiation, time points that are important for the early and efficient triage of exposed individuals. Time-dependent perturbations in metabolites were observed in the tricarboxylic acid pathway (TCA). Other differentially excreted metabolites included amino acids and metabolites associated with dysregulation of energy metabolism pathways. Time-dependent apoptotic pathway activation between WT and mutant mice following IR exposure may explain the altered excretion patterns, although the origin of the metabolites remains to be determined. This first metabolomics study in urine from radiation exposed genetic mutant animal models provides evidence that this technology can be used to dissect the effects of genotoxic agents on metabolism by assessing easily accessible biofluids and identify biomarkers of radiation exposure. Applications of metabolomics could be incorporated in the future to further elucidate the effects of IR on the metabolism of Parp1(-/-) genotype by assessing individual tissues. (C) 2016 Elsevier B.V. All rights reserved.
引用
收藏
页码:41 / 49
页数:9
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